RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 GOLGA8CPA6NN73 597 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 METTL18O95568 372 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 HOXC4P09017 264 aaPredicted RBP16.69■□□□□ 0.26
CLK3-207ENST00000562389 PIRTP0C851 137 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 CSRP1P21291 193 aaKnown RBP16.69■□□□□ 0.26
CLK3-207ENST00000562389 CHRNA4P43681 627 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 KIAA1024LP59773 190 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 GNG11P61952 73 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 IL9RQ01113 521 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 NFATC4Q14934 902 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 SUZ12Q15022 739 aaKnown RBP16.69■□□□□ 0.26
CLK3-207ENST00000562389 KCTD11Q693B1 232 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 RANBP10Q6VN20 620 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 TMC3Q7Z5M5 1100 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 PIP4P1Q86T03 277 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 PELI3Q8N2H9 469 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 SLC25A41Q8N5S1 370 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 PRELID2Q8N945 189 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 ACTRT1Q8TDG2 376 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 SAP25Q8TEE9 199 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 COG1Q8WTW3 980 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 MS4A14Q96JA4 679 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 WDR24Q96S15 920 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 ABCG8Q9H221 673 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 TRABDQ9H4I3 376 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 OR1A2Q9Y585 309 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 LAMA1P25391 3075 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 CABIN1Q9Y6J0 2220 aa16.69■□□□□ 0.26
CLK3-207ENST00000562389 TDRD6O60522 2096 aaKnown RBP16.68■□□□□ 0.26
CLK3-207ENST00000562389 PGRMC1O00264 195 aaKnown RBP16.68■□□□□ 0.26
CLK3-207ENST00000562389 FLRT2O43155 660 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 AGTP01019 485 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 IFNB1P01574 187 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 CSF2P04141 144 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 PYGLP06737 847 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 NME1P15531 152 aaKnown RBP16.68■□□□□ 0.26
CLK3-207ENST00000562389 TCP1P17987 556 aaKnown RBP16.68■□□□□ 0.26
CLK3-207ENST00000562389 HTR1BP28222 390 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 ACTN2P35609 894 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 SPINT3P49223 89 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 EIF2B5Q13144 721 aaKnown RBP16.68■□□□□ 0.26
CLK3-207ENST00000562389 RAET1GQ6H3X3 334 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 RFLNAQ6ZTI6 216 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 NAXDQ8IW45 347 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 CCDC89Q8N998 374 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 LRRC45Q96CN5 670 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 AP2M1Q96CW1 435 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 EID2BQ96D98 161 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 TBL1YQ9BQ87 522 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 GPR63Q9BZJ6 419 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 WDR26Q9H7D7 661 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 HACD3Q9P035 362 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 CD84Q9UIB8 345 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 SHOC2Q9UQ13 582 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 SPO11Q9Y5K1 396 aa16.68■□□□□ 0.26
CLK3-207ENST00000562389 H3BM21 787 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 K7ESM1 405 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 CACNB4O00305 520 aaPredicted RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 PSMD3O43242 534 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 SOD1P00441 154 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 FDFT1P37268 417 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 HENMT1Q5T8I9 393 aaKnown RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 FAXCQ5TGI0 409 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 PAPD7Q5XG87 772 aaKnown RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 KANSL1Q7Z3B3 1105 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 ATL2Q8NHH9 583 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 FUBP1Q96AE4 644 aaKnown RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 WDR92Q96MX6 357 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 NAPGQ99747 312 aaPredicted RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 TEX101Q9BY14 249 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 CDH19Q9H159 772 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 LRRC40Q9H9A6 602 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 ARNT2Q9HBZ2 717 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 RAD18Q9NS91 495 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 DNAJC28Q9NX36 388 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 PAK5Q9P286 719 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 NFKBIL1Q9UBC1 381 aaPredicted RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 FEZ2Q9UHY8 353 aaPredicted RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 COL5A1P20908 1838 aaPredicted RBP16.67■□□□□ 0.26
CLK3-207ENST00000562389 DMXL1Q9Y485 3027 aa16.67■□□□□ 0.26
CLK3-207ENST00000562389 DCDC2BA2VCK2 349 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 ERI2A8K979 691 aaKnown RBP16.66■□□□□ 0.26
CLK3-207ENST00000562389 SH3BP5O60239 455 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 PIAS2O75928 621 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 AP2A1O95782 977 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 MYCLP1P12525 358 aaPredicted RBP16.66■□□□□ 0.26
CLK3-207ENST00000562389 ETS1P14921 441 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 HMGCLP35914 325 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 GPR1P46091 355 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 DCDC1P59894 354 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 HNRNPKP61978 463 aaKnown RBP eCLIP16.66■□□□□ 0.26
CLK3-207ENST00000562389 CDK3Q00526 305 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 BNIP3Q12983 259 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 OLIG2Q13516 323 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 CYP1B1Q16678 543 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 INAVAQ3KP66 663 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 ADAMTSL4Q6UY14 1074 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 HEATR4Q86WZ0 1026 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 GATAD2AQ86YP4 633 aa16.66■□□□□ 0.26
CLK3-207ENST00000562389 TTC30BQ8N4P2 665 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms