RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 DBTP11182 482 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CDH3P22223 829 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PPIBP23284 216 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CORO1AP31146 461 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 MINDY4Q4G0A6 757 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 ATP13A5Q4VNC0 1218 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CPTPQ5TA50 214 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 BROXQ5VW32 411 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TTC29Q8NA56 475 aaPredicted RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 FAM163AQ96GL9 167 aaPredicted RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TSPAN18Q96SJ8 248 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 BHLHE41Q9C0J9 482 aaPredicted RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 FBXO5Q9UKT4 447 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 MFHAS1Q9Y4C4 1052 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 ABCA6Q8N139 1617 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 DCLK1O15075 740 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PAPSS1O43252 624 aaPredicted RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 MSI1O43347 362 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 HNRNPLP14866 589 aaKnown RBP eCLIP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 ADSSP30520 456 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CASP9P55211 416 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 SMCO1Q147U7 214 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 RFX4Q33E94 735 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 C9orf57Q5W0N0 161 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 SNX20Q7Z614 316 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 FBXW8Q8N3Y1 598 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TSPAN14Q8NG11 270 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 HDAC7Q8WUI4 952 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 BAP1Q92560 729 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 XPR1Q9UBH6 696 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 ZNF222Q9UK12 451 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 LRCH1Q9Y2L9 728 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 MRPS17Q9Y2R5 130 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 NCOA3Q9Y6Q9 1424 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PSIP1O75475 530 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PTPN9P43378 593 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PTPN5P54829 565 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TBC1D25Q3MII6 688 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 XKR4Q5GH76 650 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PTCHD4Q6ZW05 846 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PIWIL4Q7Z3Z4 852 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 LRRC52Q8N7C0 313 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 NETO2Q8NC67 525 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 RDH11Q8TC12 318 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 DNASE1L2Q92874 299 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 SLC47A1Q96FL8 570 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 FEM1CQ96JP0 617 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 ACE2Q9BYF1 805 aaPredicted RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 IKZF2Q9UKS7 526 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 EFR3BQ9Y2G0 817 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 IRAK3Q9Y616 596 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CLTCQ00610 1675 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 STBD1O95210 358 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PSMG1O95456 288 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 ITGA2BP08514 1039 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 KCNA5P22460 613 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CASP5P51878 434 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 LSM3P62310 102 aaKnown RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 SEMA5AQ13591 1074 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 LIPMQ5VYY2 423 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TMC8Q8IU68 726 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 AMER2Q8N7J2 671 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 UBR7Q8N806 425 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 OR5B17Q8NGF7 314 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TRPM4Q8TD43 1214 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 WDR18Q9BV38 432 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 GGA2Q9UJY4 613 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 RAP2CQ9Y3L5 183 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TRIM38O00635 465 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CDK14O94921 469 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TRBC1P01850 177 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 BNIP2Q12982 314 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PPIGQ13427 754 aaKnown RBP eCLIP11.24□□□□□ -0.612e-6■■■■□ 22.6
RPAP1-204ENST00000562303 FNBP1LQ5T0N5 605 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 BEND5Q7L4P6 421 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 FAM129CQ86XR2 697 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 CADM2Q8N3J6 435 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 PJA1Q8NG27 643 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 TMEM27Q9HBJ8 222 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 KCNMB3Q9NPA1 279 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 OSER1Q9NX31 292 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 GMIPQ9P107 970 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 EVLQ9UI08 416 aaPredicted RBP11.24□□□□□ -0.61
RPAP1-204ENST00000562303 RIC1Q4ADV7 1423 aa11.24□□□□□ -0.61
RPAP1-204ENST00000562303 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
RPAP1-204ENST00000562303 CAMSAP1Q5T5Y3 1602 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 FAM86C2PA6NEL3 165 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 CCDC182A6NF36 153 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 TAF4O00268 1085 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 CLDN4O14493 209 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 FFAR2O15552 330 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 C22orf31O95567 290 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ERBB2P04626 1255 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 KCTD21Q4G0X4 260 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 ANKS1BQ7Z6G8 1248 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 GALNT7Q86SF2 657 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 KBTBD8Q8NFY9 601 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 KBTBD7Q8WVZ9 684 aa11.23□□□□□ -0.61
RPAP1-204ENST00000562303 MKL1Q969V6 931 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms