RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 KIF13AQ9H1H9 1805 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 WDR17Q8IZU2 1322 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SYNGAP1Q96PV0 1343 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PAPPAQ13219 1627 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TRAV20A0A0B4J274 112 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 A0A1B0GVG6 124 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FUOMA2VDF0 154 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF716A6NP11 495 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 A8MX80 341 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MIF4GDA9UHW6 222 aaKnown RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FAM86B1E9PN63 330 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 H0YJX3 145 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 H3BNC9 293 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 H3BUI4 141 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PGRMC1O00264 195 aaKnown RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 H2AFYO75367 372 aaKnown RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PRDM1O75626 825 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FARP2O94887 1054 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MFN2O95140 757 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 AKR7A3O95154 331 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PGLSO95336 258 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 METTL18O95568 372 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 OXSR1O95747 527 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 LGI1O95970 557 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 IGFBP1P08833 259 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF735P0CB33 412 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 LAMP2P13473 410 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 DARSP14868 501 aaKnown RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 JUPP14923 745 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CYP3A5P20815 502 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CCNE1P24864 410 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ADRA1DP25100 572 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 GSTT1P30711 240 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ARL3P36405 182 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CAPGP40121 348 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ARSEP51690 589 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CLCN5P51795 746 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 POLGP54098 1239 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 OAZ1P54368 228 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 AIF1P55008 147 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ANTXR2P58335 489 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SRP54P61011 504 aaKnown RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 HNRNPKP61978 463 aaKnown RBP eCLIP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TNFRSF17Q02223 184 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CHRNDQ07001 517 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FAAP100Q0VG06 881 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 BNIP3Q12983 259 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CDK5R2Q13319 367 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PNOCQ13519 176 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TSC22D1Q15714 1073 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MAPK6Q16659 721 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FAM187BQ17R55 369 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SLC35G1Q2M3R5 365 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ZNF829Q3KNS6 432 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 PCGF3Q3KNV8 242 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ANKRD20A4Q4UJ75 823 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ANKRD20A8PQ5CZ79 823 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ZRANB3Q5FWF4 1079 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 NHSL2Q5HYW2 709 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ANKRD20A2Q5SQ80 823 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SFRP5Q5T4F7 317 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FAM69AQ5T7M9 428 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ATAD3BQ5T9A4 648 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 NT5DC1Q5TFE4 455 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ANKRD20A1Q5TYW2 823 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MFSD5Q6N075 450 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ARMC6Q6NXE6 501 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 KCNT2Q6UVM3 1135 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SUSD1Q6UWL2 747 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SLC24A5Q71RS6 500 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CBLL1Q75N03 491 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CHST3Q7LGC8 479 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TMC3Q7Z5M5 1100 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CAMKMTQ7Z624 323 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ZC3H18Q86VM9 953 aaKnown RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 NUDT13Q86X67 352 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ANKLE2Q86XL3 938 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ADSSL1Q8N142 457 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 KLHL36Q8N4N3 616 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 RNF152Q8N8N0 203 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SNX31Q8N9S9 440 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 MLKLQ8NB16 471 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CLRN3Q8NCR9 226 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 GSTCDQ8NEC7 633 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FLAD1Q8NFF5 587 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 GPR150Q8NGU9 434 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 OR14C36Q8NHC7 312 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 NCOA7Q8NI08 942 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 STT3BQ8TCJ2 826 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 SYTL5Q8TDW5 730 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FBXO32Q969P5 355 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 KTI12Q96EK9 354 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 CCDC51Q96ER9 411 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 C1GALT1C1Q96EU7 318 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 RMND5BQ96G75 393 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 TPD52L3Q96J77 140 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 ELMO2Q96JJ3 720 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 FER1L6-AS2Q96M78 137 aa5.53□□□□□ -1.52
CAPN3-211ENST00000562199 RAB3IPQ96QF0 476 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-211ENST00000562199 BBS4Q96RK4 519 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms