RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 GRM3Q14832 879 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 DLG2Q15700 870 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 CDKN3Q16667 212 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 GAB4Q2WGN9 574 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 FUT11Q495W5 492 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ARHGAP15Q53QZ3 475 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF789Q5FWF6 425 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PITRM1Q5JRX3 1037 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 DGKKQ5KSL6 1271 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ATXN7L2Q5T6C5 722 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 HHATQ5VTY9 493 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PPP4R4Q6NUP7 873 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 NEPROQ6NW34 567 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 TPGS1Q6ZTW0 290 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 KIAA0408Q6ZU52 694 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 NLRP9Q7RTR0 991 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 CMC1Q7Z7K0 106 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SRLQ86TD4 932 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 RBM23Q86U06 439 aaKnown RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ARID3BQ8IVW6 561 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ADGRG2Q8IZP9 1017 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PLD6Q8N2A8 252 aaKnown RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 BBS5Q8N3I7 341 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 C12orf76Q8N812 135 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PNPLA1Q8N8W4 532 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 MDGA1Q8NFP4 955 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 DDI1Q8WTU0 396 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PIH1D2Q8WWB5 315 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 HDAC10Q969S8 669 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ACDQ96AP0 544 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 DNAJC1Q96KC8 554 aaKnown RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 GPR78Q96P69 363 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 C2orf49Q9BVC5 232 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 KRTAP4-6Q9BYQ5 205 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 SLCO1B3Q9NPD5 702 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PCMTD2Q9NV79 361 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 NLE1Q9NVX2 485 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 NSMCE4AQ9NXX6 385 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PLK2Q9NYY3 685 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 MARCH4Q9P2E8 410 aaPredicted RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 VPS28Q9UK41 221 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 FBXO5Q9UKT4 447 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 CHKBQ9Y259 395 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 HS3ST2Q9Y278 367 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PCDHGC4Q9Y5F7 938 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ARL5AQ9Y689 179 aa6.55□□□□□ -1.36
CAPN3-210ENST00000561817 PRRC2BQ5JSZ5 2229 aaKnown RBP6.55□□□□□ -1.36
CAPN3-210ENST00000561817 ATXN2Q99700 1313 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TYW5A2RUC4 315 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CCDC162PA2VCL2 907 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 OR51F1A6NGY5 319 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ANKRD66B4E2M5 251 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TARM1B6A8C7 271 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CCL22O00626 93 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ZNF197O14709 1029 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 BIRC5O15392 142 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 GLRA3O75311 464 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SNNO75324 88 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 RPP40O75818 363 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 HAUS5O94927 633 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 PGLSO95336 258 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 GLP2RO95838 553 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 MPOP05164 745 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 C2P06681 752 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 BPGMP07738 259 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 GSTA1P08263 222 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 VIMP08670 466 aaKnown RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SBK3P0C264 359 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CISD3P0C7P0 127 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 PIRTP0C851 137 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SLC35E2BP0CK96 405 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SRCP12931 536 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 PAMP19021 973 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 GBP2P32456 591 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 AVPR1AP37288 418 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 HADHAP40939 763 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 MAPK8P45983 427 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 NRIP1P48552 1158 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 PGGT1BP53609 377 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TAS2R39P59534 338 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 RHOAP61586 193 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 AP1S1P61966 158 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 IRF9Q00978 393 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 DLG1Q12959 904 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ADGRE1Q14246 886 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 SEMA3AQ14563 771 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 ITIH4Q14624 930 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CBX2Q14781 532 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 PTPRRQ15256 657 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TAF1AQ15573 450 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 UGP2Q16851 508 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TYSND1Q2T9J0 566 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 LY6G5CQ5SRR4 150 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 C10orf62Q5T681 223 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 N4BP2L1Q5TBK1 243 aaPredicted RBP6.54□□□□□ -1.36
CAPN3-210ENST00000561817 TMEM215Q68D42 235 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 RETSATQ6NUM9 610 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 C16orf46Q6P387 395 aa6.54□□□□□ -1.36
CAPN3-210ENST00000561817 CNSTQ6PJW8 725 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms