RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CACNB4O00305 520 aaPredicted RBP25.28■■□□□ 1.64
NME3-202ENST00000561637 KDELR1P24390 212 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 MAN1A1P33908 653 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 TRIM23P36406 574 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 ELOCQ15369 112 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 ZFYVE27Q5T4F4 411 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 ARMC12Q5T9G4 340 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 OR56A4Q8NGH8 313 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 DTD2Q96FN9 168 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 RBM15Q96T37 977 aaKnown RBP eCLIP25.28■■□□□ 1.64
NME3-202ENST00000561637 TMEM168Q9H0V1 697 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 WDR26Q9H7D7 661 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 SYNDIG1Q9H7V2 258 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 RBM22Q9NW64 420 aaKnown RBP eCLIP25.28■■□□□ 1.64
NME3-202ENST00000561637 ZNHIT6Q9NWK9 470 aaKnown RBP25.28■■□□□ 1.64
NME3-202ENST00000561637 DTLQ9NZJ0 730 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 CD84Q9UIB8 345 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 DOLKQ9UPQ8 538 aa25.28■■□□□ 1.64
NME3-202ENST00000561637 C3orf70A6NLC5 250 aaPredicted RBP25.27■■□□□ 1.64
NME3-202ENST00000561637 MATN3O15232 486 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 FZD6O60353 706 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 FUCA1P04066 466 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 KRT7P08729 469 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 BLKP51451 505 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 SKOR1P84550 965 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 TBX2Q13207 712 aaPredicted RBP25.27■■□□□ 1.64
NME3-202ENST00000561637 ISXQ2M1V0 245 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 ARRDC2Q8TBH0 407 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 CCDC74AQ96AQ1 378 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 ATXN7L3BQ96GX2 97 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 CCDC3Q9BQI4 270 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 CYP4F12Q9HCS2 524 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 EVA1BQ9NVM1 165 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 MOSPD1Q9UJG1 213 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 DGKBQ9Y6T7 804 aa25.27■■□□□ 1.64
NME3-202ENST00000561637 ARHGEF17Q96PE2 2063 aaPredicted RBP25.26■■□□□ 1.63
NME3-202ENST00000561637 LRRD1A4D1F6 860 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 K7ENP7 123 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 TNFP01375 233 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 PDX1P52945 283 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 IFI16Q16666 785 aaKnown RBP25.26■■□□□ 1.63
NME3-202ENST00000561637 INO80CQ6PI98 192 aaPredicted RBP25.26■■□□□ 1.63
NME3-202ENST00000561637 NPNTQ6UXI9 565 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 B4GALNT4Q76KP1 1039 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 HEATR4Q86WZ0 1026 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 PLD5Q8N7P1 536 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 ARL10Q8N8L6 244 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 SCRN2Q96FV2 425 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 PRR11Q96HE9 360 aaPredicted RBP25.26■■□□□ 1.63
NME3-202ENST00000561637 CCDC42Q96M95 316 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 TSGA13Q96PP4 275 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 RNF157Q96PX1 679 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 POLR1EQ9GZS1 481 aaKnown RBP25.26■■□□□ 1.63
NME3-202ENST00000561637 NCKIPSDQ9NZQ3 722 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 CHKBQ9Y259 395 aa25.26■■□□□ 1.63
NME3-202ENST00000561637 GOLGA6CA6NDK9 693 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 GOLGA6BA6NDN3 693 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 PRLP01236 227 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 GOLGA6DP0CG33 693 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 CYP2A6P11509 494 aaPredicted RBP25.25■■□□□ 1.63
NME3-202ENST00000561637 POLD2P49005 469 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 RALGPS1Q5JS13 557 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 LRRC66Q68CR7 880 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 ALG1LQ6GMV1 187 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 IGF2-ASQ6U949 168 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 LRRC49Q8IUZ0 686 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 SLC46A1Q96NT5 459 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 CEP41Q9BYV8 373 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 GOLGA6AQ9NYA3 693 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 TFR2Q9UP52 801 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 ENTPD2Q9Y5L3 495 aa25.25■■□□□ 1.63
NME3-202ENST00000561637 KCNK1O00180 336 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 SOD1P00441 154 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 TNNT1P13805 278 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 CCNB1P14635 433 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 CCNCP24863 283 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 RPIAP49247 311 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 ZBTB17Q13105 803 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 TECPR1Q7Z6L1 1165 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 TAF8Q7Z7C8 310 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 GKN2Q86XP6 184 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 MAP7D3Q8IWC1 876 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 ATL2Q8NHH9 583 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 GLMNQ92990 594 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 AGAP2Q99490 1192 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 TDRD1Q9BXT4 1180 aaKnown RBP25.24■■□□□ 1.63
NME3-202ENST00000561637 PPIL1Q9Y3C6 166 aa25.24■■□□□ 1.63
NME3-202ENST00000561637 PTPN13Q12923 2485 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 A0A1W2PQ67 120 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 PRSS38A1L453 326 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 MTA2O94776 668 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 JCHAINP01591 159 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 KRT1P04264 644 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 CEACAM5P06731 702 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 MMP2P08253 660 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 HOXC4P09017 264 aaPredicted RBP25.23■■□□□ 1.63
NME3-202ENST00000561637 TPM1P09493 284 aa25.23■■□□□ 1.63
NME3-202ENST00000561637 MYCLP1P12525 358 aaPredicted RBP25.23■■□□□ 1.63
NME3-202ENST00000561637 TSR1Q2NL82 804 aaKnown RBP25.23■■□□□ 1.63
NME3-202ENST00000561637 RAET1GQ6H3X3 334 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms