RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	LURAP1L	Q8IV03	231 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CNGA4	Q8IV77	575 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	CPO	Q8IVL8	374 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ITPRIP	Q8IWB1	547 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ADGRF3	Q8IZF5	1079 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	NTN5	Q8WTR8	489 aa	Predicted RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	NOC3L	Q8WTT2	800 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	TBC1D22A	Q8WUA7	517 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ARHGEF2	Q92974	986 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	TEKT1	Q969V4	418 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ADAD1	Q96M93	576 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	JAKMIP1	Q96N16	626 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	FCRL5	Q96RD9	977 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	REEP2	Q9BRK0	252 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	DEFB129	Q9H1M3	183 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	C2orf40	Q9H1Z8	148 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	FANCF	Q9NPI8	374 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	THAP1	Q9NVV9	213 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ARL15	Q9NXU5	204 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	MTMR4	Q9NYA4	1195 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZMAT5	Q9UDW3	170 aa	Known RBP	4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	KL	Q9UEF7	1012 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	FBXL5	Q9UKA1	691 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	ARHGAP26	Q9UNA1	814 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	TNFSF13B	Q9Y275	285 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	GDA	Q9Y2T3	454 aa		4.26	□□□□□ -1.73
LRRC28-222	ENST00000561431	POLR2A	P24928	1970 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	PDS5A	Q29RF7	1337 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431		A0A0B4J203	849 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	DPPA5	A6NC42	116 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	VWA3A	A6NCI4	1184 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	CCDC69	A6NI79	296 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	C16orf96	A6NNT2	1141 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	AKR1B15	C9JRZ8	316 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	STRN	O43815	780 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	NEMF	O60524	1076 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	PROP1	O75360	226 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	GOSR1	O95249	250 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	RFPL3S	P0C7P2	107 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	HSPA8	P11142	646 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	LYL1	P12980	280 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	SCG2	P13521	617 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	PKM	P14618	531 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	HOXB9	P17482	250 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	SFPQ	P23246	707 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	PRPH2	P23942	346 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ATP5F1	P24539	256 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	MAP2K2	P36507	400 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	CTCF	P49711	727 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF84	P51523	738 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	TIMM10	P62072	90 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	YPEL5	P62699	121 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	SLC10A2	Q12908	348 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	MVP	Q14764	893 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ASIC2	Q16515	512 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	WSCD2	Q2TBF2	565 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	GXYLT1	Q4G148	440 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ODF2	Q5BJF6	829 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	C10orf76	Q5T2E6	689 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	C20orf194	Q5TEA3	1177 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ANO7	Q6IWH7	933 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	SLC30A6	Q6NXT4	461 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	RPUSD3	Q6P087	351 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	DENND1B	Q6P3S1	775 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ALKBH5	Q6P6C2	394 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	FIP1L1	Q6UN15	594 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	HEATR4	Q86WZ0	1026 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	TBC1D21	Q8IYX1	336 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ADGRF4	Q8IZF3	695 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF619	Q8N2I2	560 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	FAM47B	Q8NA70	645 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	DENND1A	Q8TEH3	1009 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	HASPIN	Q8TF76	798 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	RUFY2	Q8WXA3	655 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	RFFL	Q8WZ73	363 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	HERVK_113	Q902F9	699 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	SLF1	Q9BQI6	1058 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	LZTS2	Q9BRK4	669 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	HDHD5	Q9BXW7	423 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	GHITM	Q9H3K2	345 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	RWDD1	Q9H446	243 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	TDRD3	Q9H7E2	651 aa	Known RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	GRPEL1	Q9HAV7	217 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ERVK-5	Q9HDB9	667 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZBTB40	Q9NUA8	1239 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	HMG20B	Q9P0W2	317 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	SEMA5B	Q9P283	1151 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ORC3	Q9UBD5	711 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ZNF70	Q9UC06	446 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	AASS	Q9UDR5	926 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	SH3BGRL2	Q9UJC5	107 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	LAMP5	Q9UJQ1	280 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	ITM2B	Q9Y287	266 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	DOCK2	Q92608	1830 aa		4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	RPAP1	Q9BWH6	1393 aa	Predicted RBP	4.25	□□□□□ -1.73
LRRC28-222	ENST00000561431	GAK	O14976	1311 aa		4.24	□□□□□ -1.73
LRRC28-222	ENST00000561431	PGPEP1L	A6NFU8	196 aa		4.24	□□□□□ -1.73
LRRC28-222	ENST00000561431	TISP43	B9A030	160 aa		4.24	□□□□□ -1.73
LRRC28-222	ENST00000561431	RRH	O14718	337 aa		4.24	□□□□□ -1.73
LRRC28-222	ENST00000561431	MSI1	O43347	362 aa	Known RBP	4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms