RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	EIF2D	P41214	584 aa	Known RBP	7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	P2RY2	P41231	377 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	MXI1	P50539	228 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	LIMK1	P53667	647 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	HHEX	Q03014	270 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	EFEMP1	Q12805	493 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CBWD6	Q4V339	395 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	DCAF17	Q5H9S7	520 aa	Predicted RBP	7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CBWD3	Q5JTY5	395 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	EOGT	Q5NDL2	527 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CBWD5	Q5RIA9	395 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	KRT39	Q6A163	491 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	PALM2	Q8IXS6	379 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	DRC7	Q8IY82	874 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	TERB1	Q8NA31	727 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	SLC4A11	Q8NBS3	891 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CCDC150	Q8NCX0	1101 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CCDC26	Q8TAB7	109 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	MIEF2	Q96C03	454 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	OTUB2	Q96DC9	234 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CLPTM1L	Q96KA5	538 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	EDEM2	Q9BV94	578 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	BBS2	Q9BXC9	721 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CD93	Q9NPY3	652 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	FSCN3	Q9NQT6	498 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	TMEM74B	Q9NUR3	256 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	RAB20	Q9NX57	234 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	TCAF1	Q9Y4C2	921 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	ATP6V1D	Q9Y5K8	247 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	RAD54B	Q9Y620	910 aa		7.34	□□□□□ -1.23
MARK3-223	ENST00000561071	CFAP20	Q9Y6A4	193 aa	Known RBP	7.34	□□□□□ -1.23
MARK3-223	ENST00000561071		A0A1W2PQF6	199 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	LRRC14B	A6NHZ5	514 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	SGTA	O43765	313 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CACNG3	O60359	315 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	IPO13	O94829	963 aa	Known RBP	7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	EPB41	P11171	864 aa	Known RBP	7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	HOXB2	P14652	356 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	NTSR1	P30989	418 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	GTF2H1	P32780	548 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	MLC1	Q15049	377 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	GOLGA7B	Q2TAP0	167 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	PGS1	Q32NB8	556 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	EDRF1	Q3B7T1	1238 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	HS1BP3	Q53T59	392 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	C1QL3	Q5VWW1	255 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071		Q6ZRM9	215 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	DOK3	Q7L591	496 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	LPCAT2	Q7L5N7	544 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CCDC186	Q7Z3E2	898 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	PIGZ	Q86VD9	579 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	WDR75	Q8IWA0	830 aa	Known RBP	7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	MYO1H	Q8N1T3	1032 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	DCBLD1	Q8N8Z6	715 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	FBXL13	Q8NEE6	735 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	ENGASE	Q8NFI3	743 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	UBA3	Q8TBC4	463 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	IFI44	Q8TCB0	444 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CASKIN2	Q8WXE0	1202 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CLIP3	Q96DZ5	547 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	MVB12A	Q96EY5	273 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	MRGPRX4	Q96LA9	322 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	MRI1	Q9BV20	369 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	KRTAP9-9	Q9BYP9	154 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	KRTAP9-4	Q9BYQ2	154 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	KLC2	Q9H0B6	622 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	MOCS1	Q9NZB8	636 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CALCOCO1	Q9P1Z2	691 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	WDR35	Q9P2L0	1181 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	SLC23A1	Q9UHI7	598 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	RASAL2	Q9UJF2	1139 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	LSM7	Q9UK45	103 aa	Known RBP	7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CLEC4E	Q9ULY5	219 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	FRY	Q5TBA9	3013 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CHD6	Q8TD26	2715 aa		7.33	□□□□□ -1.24
MARK3-223	ENST00000561071	CACNA1E	Q15878	2313 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	AKAP13	Q12802	2813 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	IGF2R	P11717	2491 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	GOLGA6L4	A6NEF3	574 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071		B5MCH6	92 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	CDX4	O14627	284 aa	Predicted RBP	7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	TSPAN3	O60637	253 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	TOP3B	O95985	862 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	RALA	P11233	206 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	CD19	P15391	556 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	TRIM21	P19474	475 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	CORO1A	P31146	461 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	SELENOP	P49908	381 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	TKTL1	P51854	596 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	RAP2B	P61225	183 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	YWHAG	P61981	247 aa	Known RBP eCLIP	7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	ENPEP	Q07075	957 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	GOLGA8F	Q08AF8	430 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	GOLGA8DP	Q0D2H9	430 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	CUL2	Q13617	745 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	GEN1	Q17RS7	908 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	ZNF658	Q5TYW1	1059 aa	Predicted RBP	7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	ARHGAP17	Q68EM7	881 aa		7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	CXorf57	Q6NSI4	855 aa	Known RBP	7.32	□□□□□ -1.24
MARK3-223	ENST00000561071	RSRC2	Q7L4I2	434 aa	Known RBP	7.32	□□□□□ -1.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms