RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NIPAL4Q0D2K0 466 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 TFDP2Q14188 446 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 ARMC12Q5T9G4 340 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 LVRNQ6Q4G3 990 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 Q6ZVL8 140 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 PLD5Q8N7P1 536 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 ARRDC2Q8TBH0 407 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 FATE1Q969F0 183 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 CCDC74AQ96AQ1 378 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 SCRN2Q96FV2 425 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 ATXN7L3BQ96GX2 97 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 TSGA13Q96PP4 275 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 RNF157Q96PX1 679 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 POLR1EQ9GZS1 481 aaKnown RBP15.95■□□□□ 0.14
LMX1B-204ENST00000561065 BRD8Q9H0E9 1235 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 ASCL3Q9NQ33 180 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 GULP1Q9UBP9 304 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 GPR34Q9UPC5 381 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 DOLKQ9UPQ8 538 aa15.95■□□□□ 0.14
LMX1B-204ENST00000561065 C3orf70A6NLC5 250 aaPredicted RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 PSMD11O00231 422 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 MATN3O15232 486 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 NOBOXO60393 691 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 DXOO77932 396 aaKnown RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 NDUFA10O95299 355 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 PRLP01236 227 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TNFP01375 233 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 CYP2A6P11509 494 aaPredicted RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 ITKQ08881 620 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 C3orf38Q5JPI3 329 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 LRRC66Q68CR7 880 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 RBM44Q6ZP01 1051 aaKnown RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 USP45Q70EL2 814 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TECPR1Q7Z6L1 1165 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 GKN2Q86XP6 184 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 CCNYQ8ND76 341 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 GPR156Q8NFN8 814 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 ATL2Q8NHH9 583 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 FGF11Q92914 225 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 GLMNQ92990 594 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 HDAC11Q96DB2 347 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 PRR11Q96HE9 360 aaPredicted RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 HIC2Q96JB3 615 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 BBC3Q96PG8 261 aaPredicted RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 BAG1Q99933 345 aaPredicted RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TDRD1Q9BXT4 1180 aaKnown RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TEX101Q9BY14 249 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 FRMD8Q9BZ67 464 aaPredicted RBP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 CYP4F12Q9HCS2 524 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 SATB2Q9UPW6 733 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TTLL3Q9Y4R7 772 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 ST14Q9Y5Y6 855 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 MGAQ8IWI9 3026 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 A0A0J9YYE9 177 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 A0A1W2PQM1 296 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TNFRSF10CO14798 259 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 PSTPIP1O43586 416 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TCEA3O75764 348 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 TRBC1P01850 177 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 CEACAM5P06731 702 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 MMP2P08253 660 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 KELP23276 732 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 NR2C2P49116 596 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 CDK3Q00526 305 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 ZBTB17Q13105 803 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 PDK1Q15118 436 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 B3GNT8Q7Z7M8 397 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 NRROSQ86YC3 692 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 RCOR2Q8IZ40 523 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 SDR16C5Q8N3Y7 309 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 UBE2Q2Q8WVN8 375 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 FERMT1Q9BQL6 677 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 SYNDIG1Q9H7V2 258 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 POLR1BQ9H9Y6 1135 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 RBM22Q9NW64 420 aaKnown RBP eCLIP15.94■□□□□ 0.14
LMX1B-204ENST00000561065 CD84Q9UIB8 345 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 CHKBQ9Y259 395 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 ALG6Q9Y672 507 aa15.94■□□□□ 0.14
LMX1B-204ENST00000561065 UNC13CQ8NB66 2214 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 CAPN8A6NHC0 703 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 B4DGG1 531 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 KCNK1O00180 336 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 APOL1O14791 398 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 PPP1R12AO14974 1030 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-204ENST00000561065 NRDCO43847 1150 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 ZRANB2O95218 330 aaKnown RBP eCLIP15.93■□□□□ 0.14
LMX1B-204ENST00000561065 CCNB1P14635 433 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 COMTP21964 271 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 ACTN2P35609 894 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 LSSP48449 732 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 GSDMDP57764 484 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 CCDC173Q0VFZ6 552 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 SOWAHCQ53LP3 525 aaPredicted RBP15.93■□□□□ 0.14
LMX1B-204ENST00000561065 RAET1GQ6H3X3 334 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 TAF8Q7Z7C8 310 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 DAAM2Q86T65 1068 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 KIAA1328Q86T90 577 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 GAS2L3Q86XJ1 694 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 CCDC13Q8IYE1 715 aa15.93■□□□□ 0.14
LMX1B-204ENST00000561065 CNTD1Q8N815 330 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms