RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 K7ELQ4 463 aaPredicted RBP9.51□□□□□ -0.89
HERC1-210ENST00000560897 CEACAM4O75871 244 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 RECQL5O94762 991 aaPredicted RBP9.51□□□□□ -0.89
HERC1-210ENST00000560897 CALCAP01258 141 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 ANKRD34CP0C6C1 535 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 PTGIRP43119 386 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 NDST2P52849 883 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 RPS18P62269 152 aaKnown RBP9.51□□□□□ -0.89
HERC1-210ENST00000560897 PDE1BQ01064 536 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 HHEXQ03014 270 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 NFATC2Q13469 925 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 GRM3Q14832 879 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 KYNUQ16719 465 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 PLEKHN1Q494U1 663 aaPredicted RBP9.51□□□□□ -0.89
HERC1-210ENST00000560897 CBWD6Q4V339 395 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 CBWD3Q5JTY5 395 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 CBWD5Q5RIA9 395 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 DENND1BQ6P3S1 775 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 TMEM110Q86TL2 294 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 PPP1R3BQ86XI6 285 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 GRAMD1CQ8IYS0 662 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 HCAR2Q8TDS4 363 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 SLC37A2Q8TED4 501 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 SNX21Q969T3 373 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 C1orf74Q96LT6 269 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 LGR4Q9BXB1 951 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 TTYH3Q9C0H2 523 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 BRD8Q9H0E9 1235 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 EPB41L1Q9H4G0 881 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 SIDT1Q9NXL6 827 aaKnown RBP9.51□□□□□ -0.89
HERC1-210ENST00000560897 C5AR2Q9P296 337 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 SUCOQ9UBS9 1254 aaKnown RBP9.51□□□□□ -0.89
HERC1-210ENST00000560897 STAP1Q9ULZ2 295 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 ATP8A1Q9Y2Q0 1164 aa9.51□□□□□ -0.89
HERC1-210ENST00000560897 NIPBLQ6KC79 2804 aaeCLIP9.5□□□□□ -0.89
HERC1-210ENST00000560897 IGLV3-10A0A075B6K4 115 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 TRBV23OR9-2A0A075B6M9 112 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 CFAP69A5D8W1 941 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 GOLGA6CA6NDK9 693 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 GOLGA6BA6NDN3 693 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 RNF225M0QZC1 329 aaPredicted RBP9.5□□□□□ -0.89
HERC1-210ENST00000560897 CETN3O15182 167 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 BUB1O43683 1085 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 KLRC4O43908 158 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 CUTAO60888 179 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 DAB1O75553 588 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 SPAG6O75602 509 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 TMCC1O94876 653 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 TMEM63AO94886 807 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 MAP3K6O95382 1288 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 PIGNO95427 931 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 CD160O95971 181 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 ALPPP05187 535 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 GOLGA6DP0CG33 693 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 KRT5P13647 590 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 CD99P14209 185 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 HTR1EP28566 365 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 TRIM23P36406 574 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 ACVRL1P37023 503 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 MMP12P39900 470 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 NASPP49321 788 aaPredicted RBP9.5□□□□□ -0.89
HERC1-210ENST00000560897 SULT1E1P49888 294 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 SEPHS1P49903 392 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 EPHA4P54764 986 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 RRADP55042 308 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 PDCLQ13371 301 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 ACOX1Q15067 660 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 SMTNL2Q2TAL5 461 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 VWA5B1Q5TIE3 1220 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 PNCKQ6P2M8 343 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 BRAT1Q6PJG6 821 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 LEKR1Q6ZMV7 388 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 TAOK1Q7L7X3 1001 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 PARP9Q8IXQ6 854 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 ZNF683Q8IZ20 524 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 CASKIN2Q8WXE0 1202 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 TM9SF4Q92544 642 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 SMAD5Q99717 465 aaKnown RBP9.5□□□□□ -0.89
HERC1-210ENST00000560897 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.5□□□□□ -0.89
HERC1-210ENST00000560897 PIGVQ9NUD9 493 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 TMEM51Q9NW97 253 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 GOLGA6AQ9NYA3 693 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 SERTAD1Q9UHV2 236 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 COQ4Q9Y3A0 265 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 MFHAS1Q9Y4C4 1052 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 MDC1Q14676 2089 aaKnown RBP9.5□□□□□ -0.89
HERC1-210ENST00000560897 MYO7BQ6PIF6 2116 aa9.5□□□□□ -0.89
HERC1-210ENST00000560897 PRICKLE3O43900 615 aaPredicted RBP9.49□□□□□ -0.89
HERC1-210ENST00000560897 KLHL41O60662 606 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 RAMP2O60895 175 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 RASSF9O75901 435 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 CEACAM5P06731 702 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 LPOP22079 712 aaPredicted RBP9.49□□□□□ -0.89
HERC1-210ENST00000560897 ADCY8P40145 1251 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 CXCR3P49682 368 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 SNX16P57768 344 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 DEUP1Q05D60 604 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 CETN1Q12798 172 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 IL10RAQ13651 578 aa9.49□□□□□ -0.89
HERC1-210ENST00000560897 RAPSNQ13702 412 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms