RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 RUFY1Q96T51 708 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 WNT10AQ9GZT5 417 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 CLIC5Q9NZA1 410 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 PDP2Q9P2J9 529 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 SIX4Q9UIU6 781 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 STOML2Q9UJZ1 356 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 NME7Q9Y5B8 376 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 FHOD1Q9Y613 1164 aa6.46□□□□□ -1.38
HERC1-208ENST00000560462 IGHV1OR21-1A0A087WYE8 117 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 TRBV23-1A0A0A0MS06 115 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 A8MXQ7 604 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 TOR1BO14657 336 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 RGS13O14921 159 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 CLIC2O15247 247 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 BEST1O76090 585 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 IPO13O94829 963 aaKnown RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 ECEL1O95672 775 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 MT-ND3P03897 115 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 IFNAR1P17181 557 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 L1CAMP32004 1257 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 NDST1P52848 882 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 NDST2P52849 883 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 MAP3K7CLP57077 242 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 RPS15P62841 145 aaKnown RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 CDH18Q13634 790 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 SYCP1Q15431 976 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 ZNF174Q15697 407 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 NTRK3Q16288 839 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 ACCSLQ4AC99 568 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 EFHC1Q5JVL4 640 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 SHEQ5VZ18 495 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 HAUS3Q68CZ6 603 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 SLC39A4Q6P5W5 647 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 RFWD3Q6PCD5 774 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 CRELD2Q6UXH1 353 aaPredicted RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 PAQR9Q6ZVX9 377 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 ERN2Q76MJ5 926 aaKnown RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 DYMQ7RTS9 669 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 GPRIN1Q7Z2K8 1008 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 ARHGAP22Q7Z5H3 698 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 SCD5Q86SK9 330 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 ZSCAN30Q86W11 494 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 KRTAP1-3Q8IUG1 177 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 PPM1KQ8N3J5 372 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 ARFGAP1Q8N6T3 406 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 KIAA1524Q8TCG1 905 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 CA5BP1Q8WTZ4 195 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 FAM84AQ96KN4 292 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 SMOQ99835 787 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 WDR77Q9BQA1 342 aaPredicted RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 AARSD1Q9BTE6 412 aaKnown RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 TIPINQ9BVW5 301 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 BRD8Q9H0E9 1235 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 LHX9Q9NQ69 397 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 ARHGEF38Q9NXL2 777 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 APEX2Q9UBZ4 518 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 KLHL3Q9UH77 587 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 LNPEPQ9UIQ6 1025 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 GDF2Q9UK05 429 aaPredicted RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 AGO2Q9UKV8 859 aaKnown RBP6.45□□□□□ -1.38
HERC1-208ENST00000560462 KIF3AQ9Y496 699 aa6.45□□□□□ -1.38
HERC1-208ENST00000560462 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.45□□□□□ -1.38
HERC1-208ENST00000560462 CNTRLQ7Z7A1 2325 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 IGLON5A6NGN9 336 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 SLC27A2O14975 620 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 KLHL41O60662 606 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 SLCO2B1O94956 709 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 NDUFA10O95299 355 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 RAF1P04049 648 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 TRIM49P0CI25 452 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 TRIM49CP0CI26 452 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 ALAS2P22557 587 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 IGFALSP35858 605 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 CCT6AP40227 531 aaKnown RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 PPM1FP49593 454 aaPredicted RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 TDGF1P3P51864 188 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 NCKAP1LP55160 1127 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 SRP54P61011 504 aaKnown RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 SUMO1P63165 101 aaKnown RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 NKX6-1P78426 367 aaPredicted RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 FSCBQ5H9T9 825 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 FAM209AQ5JX71 171 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 PIK3R6Q5UE93 754 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 B3GNTL1Q67FW5 361 aaPredicted RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 RASGRP3Q8IV61 690 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 MRPL41Q8IXM3 137 aaKnown RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 CARNMT1Q8N4J0 409 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 ADAMTS17Q8TE56 1095 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 COG1Q8WTW3 980 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 LARP4BQ92615 738 aaKnown RBP6.44□□□□□ -1.38
HERC1-208ENST00000560462 AZIN2Q96A70 460 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 JAKMIP2Q96AA8 810 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 CCDC127Q96BQ5 260 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 CLUHP3Q96NS8 147 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 HDAC8Q9BY41 377 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 AMBRA1Q9C0C7 1298 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 MTMR12Q9C0I1 747 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 CSNK1G1Q9HCP0 422 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 ZNHIT2Q9UHR6 403 aa6.44□□□□□ -1.38
HERC1-208ENST00000560462 KCNJ14Q9UNX9 436 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms