RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 UGT2B4P06133 528 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 TCP1P17987 556 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 MAP4P27816 1152 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 OAS2P29728 719 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 GPD2P43304 727 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 GABRB2P47870 512 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 RPL34P49207 117 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 TUBB4BP68371 445 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 PITX1P78337 314 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 TRA2AQ13595 282 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 HLTFQ14527 1009 aaKnown RBP eCLIP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 IRF4Q15306 451 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 CLPPQ16740 277 aaPredicted RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 PLEKHA7Q6IQ23 1121 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 TCTN3Q6NUS6 607 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 TICAM1Q8IUC6 712 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 DEFB106AQ8N104 65 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 WDTC1Q8N5D0 677 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 OR6K2Q8NGY2 324 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 STARD8Q92502 1023 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 WDR92Q96MX6 357 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 TEFMQ96QE5 360 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 WRAP53Q9BUR4 548 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 OSBPL1AQ9BXW6 950 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 PDCL3Q9H2J4 239 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 MRPL47Q9HD33 250 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 RNF14Q9UBS8 474 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 MOSPD1Q9UJG1 213 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 CDC23Q9UJX2 597 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 SNX12Q9UMY4 172 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 SCINQ9Y6U3 715 aa9.34□□□□□ -0.91
SMAD3-215ENST00000560424 SPENQ96T58 3664 aaKnown RBP9.34□□□□□ -0.91
SMAD3-215ENST00000560424 IGHV5-10-1A0A0J9YXX1 117 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 TMCO5BA8MYB1 307 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 E5RJQ4 531 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 PAGE1O75459 146 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 PCCBP05166 539 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 POU3F2P20265 443 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-215ENST00000560424 SCNN1AP37088 669 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 OR1D5P58170 312 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 SNRPD1P62314 119 aaKnown RBP9.33□□□□□ -0.92
SMAD3-215ENST00000560424 RAD51Q06609 339 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 WHAMMP3Q1A5X7 153 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 ALFQ53S48 1182 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 LRRC73Q5JTD7 316 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 NAA35Q5VZE5 725 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 ZNF572Q7Z3I7 529 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-215ENST00000560424 UNC5BQ8IZJ1 945 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 TP53I13Q8NBR0 393 aaPredicted RBP9.33□□□□□ -0.92
SMAD3-215ENST00000560424 MSANTD4Q8NCY6 345 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 C3orf20Q8ND61 904 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 OR7D4Q8NG98 312 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 FNIP1Q8TF40 1166 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 PMEPA1Q969W9 287 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 ZNF653Q96CK0 615 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 PDXPQ96GD0 296 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 KLHL32Q96NJ5 620 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 RBM15Q96T37 977 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMAD3-215ENST00000560424 NUDT22Q9BRQ3 303 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 APOOQ9BUR5 198 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 TLR10Q9BXR5 811 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 SLC29A3Q9BZD2 475 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 TRIT1Q9H3H1 467 aaKnown RBP9.33□□□□□ -0.92
SMAD3-215ENST00000560424 WDCPQ9H6R7 721 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 PARVAQ9NVD7 372 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 ADAM22Q9P0K1 906 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 MAP10Q9P2G4 905 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 CNOT8Q9UFF9 292 aaKnown RBP9.33□□□□□ -0.92
SMAD3-215ENST00000560424 OR1A2Q9Y585 309 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 SAR1BQ9Y6B6 198 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 CHD5Q8TDI0 1954 aa9.33□□□□□ -0.92
SMAD3-215ENST00000560424 MIF4GDA9UHW6 222 aaKnown RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 CACNB4O00305 520 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 INPP4BO15327 924 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 BUB1O43683 1085 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 BUB1BO60566 1050 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 HSF2BPO75031 334 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 ZNF821O75541 412 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 RFPL1O75677 317 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 URI1O94763 535 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 CALCAP01258 141 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 ATP1A1P05023 1023 aaKnown RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 GLI1P08151 1106 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 KELP23276 732 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 GKP32189 559 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 SLC1A1P43005 524 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 LIMK2P53671 638 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 NAP1L1P55209 391 aaKnown RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 GEMIN4P57678 1058 aaKnown RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 SNX16P57768 344 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 B4GALNT1Q00973 533 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 ABHD18Q0P651 414 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 ELP6Q0PNE2 266 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 MAMLD1Q13495 774 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 EIF4EBP2Q13542 120 aaPredicted RBP9.32□□□□□ -0.92
SMAD3-215ENST00000560424 INPP5AQ14642 412 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 C5orf22Q49AR2 442 aa9.32□□□□□ -0.92
SMAD3-215ENST00000560424 EFHC1Q5JVL4 640 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms