RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 NSUN2Q08J23 767 aaKnown RBP eCLIP19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 VWA3BQ502W6 1294 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 WDR59Q6PJI9 974 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 ATCAYQ86WG3 371 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 ZNF677Q86XU0 584 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 NRSN1Q8IZ57 195 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 SCARF2Q96GP6 870 aaPredicted RBP19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 C11orf70Q9BRQ4 267 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 STK33Q9BYT3 514 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 SUDS3Q9H7L9 328 aaPredicted RBP19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 B4GALT6Q9UBX8 382 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 FZD10Q9ULW2 581 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 KCNMB2Q9Y691 235 aa19.73■□□□□ 0.75
RABGGTA-214ENST00000560163 PRRC2CQ9Y520 2896 aaKnown RBP19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 NR1D1P20393 614 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 FASLGP48023 281 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 POLD2P49005 469 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 CDK3Q00526 305 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 ATP1A1-AS1Q5TC04 95 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 STARD8Q92502 1023 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 NUS1Q96E22 293 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 CTRCQ99895 268 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 ZPBPQ9BS86 351 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 SLC39A8Q9C0K1 460 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 PLEKHM1Q9Y4G2 1056 aa19.72■□□□□ 0.75
RABGGTA-214ENST00000560163 CREBBPQ92793 2442 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 FGF10O15520 208 aaPredicted RBP19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 PALMO75781 387 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 DLGAP3O95886 979 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 IVLP07476 585 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 KRT7P08729 469 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 UNGP13051 313 aaPredicted RBP19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 GPD1P21695 349 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 PAPOLAP51003 745 aaKnown RBP19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 MC1RQ01726 317 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 CDR2Q01850 454 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 BIRC2Q13490 618 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 PEX6Q13608 980 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 SEPT6Q14141 434 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 CNGA3Q16281 694 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 TCTN3Q6NUS6 607 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 WDR74Q6RFH5 385 aaPredicted RBP19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 CEACAM20Q6UY09 585 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 TRIT1Q9H3H1 467 aaKnown RBP19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 APMAPQ9HDC9 416 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 KCTD5Q9NXV2 234 aa19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 TEP1Q99973 2627 aaKnown RBP19.71■□□□□ 0.75
RABGGTA-214ENST00000560163 STK17BO94768 372 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 TCN2P20062 427 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 F8A1P23610 371 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 TEAD1P28347 426 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 ERCC5P28715 1186 aaPredicted RBP19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 STAT5AP42229 794 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 AIF1P55008 147 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 DTD2Q96FN9 168 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 CELF6Q96J87 481 aaKnown RBP19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 TUBGCP2Q9BSJ2 902 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 KIAA1468Q9P260 1216 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 KCTD3Q9Y597 815 aa19.7■□□□□ 0.74
RABGGTA-214ENST00000560163 TCRBV5S1A1TA0A578 114 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 CCP110O43303 1012 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 HEXIM1O94992 359 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 ETV3P41162 512 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 ACTR1BP42025 376 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 UQCRFS1P47985 274 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 ACTR1AP61163 376 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 C16orf46Q6P387 395 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 SCYL2Q6P3W7 929 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 ZNF761Q86XN6 746 aaPredicted RBP19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 PCDHB18PQ96TA0 734 aa19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 MRPS18BQ9Y676 258 aaKnown RBP19.69■□□□□ 0.74
RABGGTA-214ENST00000560163 SIGLEC16A6NMB1 481 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 A8MU76 341 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 HTRA2O43464 458 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 GADD45BO75293 160 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 PRKCSHP14314 528 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 HTR7P34969 479 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 SCNN1BP51168 640 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 ZNF143P52747 638 aaPredicted RBP19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 MAP7Q14244 749 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 CAPRIN2Q6IMN6 1127 aaKnown RBP19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 HSD11B1LQ7Z5J1 315 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 ARHGAP12Q8IWW6 846 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 SFRP1Q8N474 314 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 TEX19Q8NA77 164 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 C3orf20Q8ND61 904 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 OR10G6Q8NH81 332 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 SLC37A2Q8TED4 501 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 DONSONQ9NYP3 566 aa19.68■□□□□ 0.74
RABGGTA-214ENST00000560163 ARHGAP42A6NI28 874 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 GFPT2O94808 682 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 EML2O95834 649 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 SOD1P00441 154 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 FURINP09958 794 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 LHCGRP22888 699 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 VIPR1P32241 457 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 MAN1A1P33908 653 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 AP1S1P61966 158 aa19.67■□□□□ 0.74
RABGGTA-214ENST00000560163 DPTQ07507 201 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms