RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ADRA1AP35348 466 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 FDFT1P37268 417 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PSMD8P48556 350 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 RENBPP51606 427 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 ID3Q02535 119 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 LMNB2Q03252 620 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 GRSF1Q12849 480 aaKnown RBP eCLIP5.25□□□□□ -1.57
SPG11-220ENST00000559933 SEPT6Q14141 434 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 DMC1Q14565 340 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PTPRCAPQ14761 206 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 EFTUD2Q15029 972 aaKnown RBP eCLIP5.25□□□□□ -1.57
SPG11-220ENST00000559933 PARP6Q2NL67 630 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 BBS9Q3SYG4 887 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.25□□□□□ -1.57
SPG11-220ENST00000559933 CYP27C1Q4G0S4 372 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 GLE1Q53GS7 698 aaKnown RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 CARD16Q5EG05 197 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 C9orf64Q5T6V5 341 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 ALG1LQ6GMV1 187 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 ITPRIPL1Q6GPH6 555 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 DENND5AQ6IQ26 1287 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 FBXO38Q6PIJ6 1188 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SERPINA13PQ6UXR4 307 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PPP1R21Q6ZMI0 780 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 KDM7AQ6ZMT4 941 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SYDE1Q6ZW31 735 aaPredicted RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 SRLQ86TD4 932 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 CAND1Q86VP6 1230 aaKnown RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 RALGPS2Q86X27 583 aaPredicted RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 PPIL6Q8IXY8 311 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 CHPFQ8IZ52 775 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PNPLA1Q8N8W4 532 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 IL17RCQ8NAC3 791 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 OR2AP1Q8NGE2 309 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SEC14L1Q92503 715 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PTPRN2Q92932 1015 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 FATE1Q969F0 183 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 ARRDC3Q96B67 414 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 TADA1Q96BN2 335 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 RUNDC3BQ96NL0 473 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 ZNF599Q96NL3 588 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SERPINB12Q96P63 405 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 NUDCD1Q96RS6 583 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 TRIB3Q96RU7 358 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 KRTAP4-8Q9BYQ9 185 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 RAB17Q9H0T7 212 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SLC25A51Q9H1U9 297 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 CCDC86Q9H6F5 360 aaKnown RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 RETREG1Q9H6L5 497 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 ACSS3Q9H6R3 686 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PLAC1Q9HBJ0 212 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SSU72Q9NP77 194 aaKnown RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 SAYSD1Q9NPB0 183 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 PRSS16Q9NQE7 514 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SYBUQ9NX95 663 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 WHRNQ9P202 907 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 THAP10Q9P2Z0 257 aaPredicted RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 HECAQ9UBI9 543 aaPredicted RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 SERGEFQ9UGK8 458 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 TRHDEQ9UKU6 1024 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 SARDHQ9UL12 918 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 TPX2Q9ULW0 747 aaKnown RBP5.25□□□□□ -1.57
SPG11-220ENST00000559933 SORCS3Q9UPU3 1222 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 CHMP2BQ9UQN3 213 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 FAM50BQ9Y247 325 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 KCTD3Q9Y597 815 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 RAI2Q9Y5P3 530 aa5.25□□□□□ -1.57
SPG11-220ENST00000559933 CKAP5Q14008 2032 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 USP34Q70CQ2 3546 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 A0A1W2PQF6 199 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 TARSL2A2RTX5 802 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 FAM170BA6NMN3 283 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 TRAFD1O14545 582 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 AURKAO14965 403 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 GPR39O43194 453 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 RNGTTO60942 597 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 GSRP00390 522 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 CPP00450 1065 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ASLP04424 464 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ATP5BP06576 529 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 DCNP07585 359 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 SRPRAP08240 638 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 HOXB2P14652 356 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 GLULP15104 373 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 TPSB2P20231 275 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ACTN2P35609 894 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 EIF2DP41214 584 aaKnown RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 ELK3P41970 407 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 MAGEA6P43360 314 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 TNNT3P45378 269 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 MAPK8P45983 427 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 PXNP49023 591 aaPredicted RBP5.24□□□□□ -1.57
SPG11-220ENST00000559933 COPAP53621 1224 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 GEMP55040 296 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ST8SIA6P61647 398 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 TMPRSS15P98073 1019 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 PFKPQ01813 784 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 SULT2A1Q06520 285 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 ZNF33AQ06730 810 aa5.24□□□□□ -1.57
SPG11-220ENST00000559933 PDIA2Q13087 525 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms