RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PELI3Q8N2H9 469 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 ARFGAP1Q8N6T3 406 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 RTL3Q8N8U3 475 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 EXD3Q8N9H8 876 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 PLA2G15Q8NCC3 412 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 WDR36Q8NI36 951 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 PCDH19Q8TAB3 1148 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 BTN2A2Q8WVV5 523 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 TSACCQ96A04 125 aaPredicted RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 CCDC74AQ96AQ1 378 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 GRAMD1AQ96CP6 724 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 LIN37Q96GY3 246 aaPredicted RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 EXOC2Q96KP1 924 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 GDAP1L1Q96MZ0 367 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 SYT11Q9BT88 431 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 CPEB1Q9BZB8 566 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 HSD3B7Q9H2F3 369 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 LRRC19Q9H756 370 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 PCDH12Q9NPG4 1184 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 NLRC4Q9NPP4 1024 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 ANO10Q9NW15 660 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 NCKIPSDQ9NZQ3 722 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 IPO11Q9UI26 975 aaKnown RBP5.84□□□□□ -1.47
USP3-215ENST00000559771 FZD10Q9ULW2 581 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 OR1A2Q9Y585 309 aa5.84□□□□□ -1.47
USP3-215ENST00000559771 COL6A6A6NMZ7 2263 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 CCDC187A0A096LP49 1063 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 TMEM202A6NGA9 273 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SIGLEC16A6NMB1 481 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 D6RAR5 112 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 J3QKU1 62 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 TOR1BO14657 336 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 TNFSF15O95150 251 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 FUCA1P04066 466 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ANXA6P08133 673 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ITGA2BP08514 1039 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 KRT3P12035 628 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 C6P13671 934 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 WT1P19544 449 aaPredicted RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 GPD1P21695 349 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 EPHB2P29323 1055 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 RBMS1P29558 406 aaKnown RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 CDC25BP30305 580 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SLC5A2P31639 672 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 UGT1A5P35504 534 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 MMP12P39900 470 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 LIG3P49916 1009 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 PEX5P50542 639 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ZNF143P52747 638 aaPredicted RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 YBEYP58557 167 aaPredicted RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 SRP54P61011 504 aaKnown RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 PPARDQ03181 441 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ZFP36L1Q07352 338 aaKnown RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 PTK2BQ14289 1009 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 NFATC4Q14934 902 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 LRRC14Q15048 493 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 STX1AQ16623 288 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 CA9Q16790 459 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 UGP2Q16851 508 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 TPD52L1Q16890 204 aaPredicted RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 TAF1BQ53T94 588 aaPredicted RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 FAXCQ5TGI0 409 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 BROXQ5VW32 411 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 AFMIDQ63HM1 303 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 OGFOD3Q6PK18 319 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 LVRNQ6Q4G3 990 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SARM1Q6SZW1 724 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ARHGAP36Q6ZRI8 547 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 LCNL1Q6ZST4 164 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SLFN11Q7Z7L1 901 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 CAMK1DQ8IU85 385 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 HID1Q8IV36 788 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ARHGAP12Q8IWW6 846 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 TP53INP2Q8IXH6 220 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SDR16C5Q8N3Y7 309 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ARL10Q8N8L6 244 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 RNF214Q8ND24 703 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 C3orf20Q8ND61 904 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 GPR156Q8NFN8 814 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 CCL4L1Q8NHW4 92 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 TPCN2Q8NHX9 752 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ENOX1Q8TC92 643 aaKnown RBP5.83□□□□□ -1.48
USP3-215ENST00000559771 HCAR2Q8TDS4 363 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 CXorf40AQ8TE69 158 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 CASKIN2Q8WXE0 1202 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 OR1E3Q8WZA6 343 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 NAT6Q93015 286 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ECHDC3Q96DC8 303 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 ARHGEF26Q96DR7 871 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 PDXPQ96GD0 296 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 PEBP4Q96S96 227 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 RBM15Q96T37 977 aaKnown RBP eCLIP5.83□□□□□ -1.48
USP3-215ENST00000559771 BPIFA3Q9BQP9 254 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 APOOQ9BUR5 198 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 LGR4Q9BXB1 951 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 EDEM3Q9BZQ6 932 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 FOXP3Q9BZS1 431 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SLC13A1Q9BZW2 595 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 SLC39A8Q9C0K1 460 aa5.83□□□□□ -1.48
USP3-215ENST00000559771 VPS16Q9H269 839 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms