RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 TUBB2AQ13885 445 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 TPSAB1Q15661 275 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 ANKRD22Q5VYY1 191 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 SYDE1Q6ZW31 735 aaPredicted RBP17.42■□□□□ 0.38
TPM1-214ENST00000558544 TMC3Q7Z5M5 1100 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 PTAR1Q7Z6K3 402 aaPredicted RBP17.42■□□□□ 0.38
TPM1-214ENST00000558544 TTC30BQ8N4P2 665 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 DNAAF3Q8N9W5 541 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 CEP76Q8TAP6 659 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 CPT1BQ92523 772 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 BMFQ96LC9 184 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 TUBB2BQ9BVA1 445 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 TRABDQ9H4I3 376 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 FSCN3Q9NQT6 498 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 PKD2L2Q9NZM6 624 aa17.42■□□□□ 0.38
TPM1-214ENST00000558544 TDRD6O60522 2096 aaKnown RBP17.42■□□□□ 0.38
TPM1-214ENST00000558544 A0A1W2PR77 199 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 A6NNZ2 444 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 BUD23O43709 281 aaKnown RBP17.41■□□□□ 0.38
TPM1-214ENST00000558544 ADCY8P40145 1251 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 SPINT3P49223 89 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 MSLNQ13421 630 aaPredicted RBP17.41■□□□□ 0.38
TPM1-214ENST00000558544 TEAD4Q15561 434 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 SLC23A3Q6PIS1 610 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 KYAT3Q6YP21 454 aaKnown RBP17.41■□□□□ 0.38
TPM1-214ENST00000558544 PELI3Q8N2H9 469 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 PLA2G15Q8NCC3 412 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 ABCG8Q9H221 673 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 BPIFA1Q9NP55 256 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 PARD6AQ9NPB6 346 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 CASS4Q9NQ75 786 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.41■□□□□ 0.383e-7■■□□□ 13.4
TPM1-214ENST00000558544 HS3ST3A1Q9Y663 406 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 ARL5AQ9Y689 179 aa17.41■□□□□ 0.38
TPM1-214ENST00000558544 A0A1B0GVT2 93 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 K7ESM1 405 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 DNALI1O14645 258 aaPredicted RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 KHNYNO15037 678 aaKnown RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 RAD51CO43502 376 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 GFRA3O60609 400 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 TMEM63AO94886 807 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 THEGLP0DJG4 465 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 MAGEA6P43360 314 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 SEPT6Q14141 434 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 POU6F1Q14863 301 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 SF3A2Q15428 464 aaKnown RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 ESRP1Q6NXG1 681 aaKnown RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 ABI3BPQ7Z7G0 1075 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 MFSD2AQ8NA29 543 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 OR13H1Q8NG92 308 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 BRSK1Q8TDC3 778 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 SCAMP4Q969E2 229 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 AP2M1Q96CW1 435 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 NUSAP1Q9BXS6 441 aaKnown RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 CAPN10Q9HC96 672 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 SEMA4GQ9NTN9 838 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 KCTD5Q9NXV2 234 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 SLC6A14Q9UN76 642 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 EP300Q09472 2414 aaPredicted RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 ZNF292O60281 2723 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 KNL1Q8NG31 2342 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 LRP3O75074 770 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 ZNF806P0C7X5 589 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 HMGCLP35914 325 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 C21orf59P57076 290 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 IRX4P78413 519 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 CDK16Q00536 496 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 BNC1Q01954 994 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 GRIK2Q13002 908 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 INPP5AQ14642 412 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 PTPRCAPQ14761 206 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 TAF1AQ15573 450 aaPredicted RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 CERCAMQ5T4B2 595 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 ALS2CLQ60I27 953 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 RAET1GQ6H3X3 334 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 ZNF534Q76KX8 674 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 RAVER1Q8IY67 606 aaKnown RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 NRSN1Q8IZ57 195 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 KLHDC7BQ96G42 594 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 RIOK2Q9BVS4 552 aaKnown RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 TRIM31Q9BZY9 425 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 ANKRD6Q9Y2G4 727 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 FNDC3AQ9Y2H6 1198 aaKnown RBP17.4■□□□□ 0.38
TPM1-214ENST00000558544 KCTD3Q9Y597 815 aa17.4■□□□□ 0.38
TPM1-214ENST00000558544 RGSL1A5PLK6 1076 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 C2orf81A6NN90 581 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 GOLGA8MH3BSY2 632 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 TLR4O00206 839 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 VILLO15195 856 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 CRTAMO95727 393 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 BPIP17213 487 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 LPOP22079 712 aaPredicted RBP17.39■□□□□ 0.37
TPM1-214ENST00000558544 IVDP26440 423 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 RABIFP47224 123 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 SESN2P58004 480 aaPredicted RBP17.39■□□□□ 0.37
TPM1-214ENST00000558544 MTM1Q13496 603 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 CSRP2Q16527 193 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 CCDC38Q502W7 563 aa17.39■□□□□ 0.37
TPM1-214ENST00000558544 DNTTIP2Q5QJE6 756 aaKnown RBP17.39■□□□□ 0.37
TPM1-214ENST00000558544 RNASEH2BQ5TBB1 312 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms