RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 PTGES3LE9PB15 166 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 MC4RP32245 332 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 ECT2LQ008S8 904 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 ZNF789Q5FWF6 425 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 PAQR9Q6ZVX9 377 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 C3orf58Q8NDZ4 430 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 ZMIZ2Q8NF64 920 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 PTCD2Q8WV60 388 aaKnown RBP15.46■□□□□ 0.06
AP4E1-202ENST00000558439 CANT1Q8WVQ1 401 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 BTBD9Q96Q07 612 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 TMLHEQ9NVH6 421 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 ANAPC2Q9UJX6 822 aa15.46■□□□□ 0.06
AP4E1-202ENST00000558439 HLA-DPA1P20036 260 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 PURAQ00577 322 aaKnown RBP15.45■□□□□ 0.06
AP4E1-202ENST00000558439 OCA2Q04671 838 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 ALFQ53S48 1182 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 TRMOQ9BU70 441 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 BEGAINQ9BUH8 593 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 DPY30Q9C005 99 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.45■□□□□ 0.06
AP4E1-202ENST00000558439 A6NHS1 94 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 PDLIM1O00151 329 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 ZNF682O95780 498 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 IL1BP01584 269 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 PRKAR2AP13861 404 aaKnown RBP15.45■□□□□ 0.06
AP4E1-202ENST00000558439 PLD1Q13393 1074 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 ZNF276Q8N554 614 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 OR10T2Q8NGX3 314 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 ASB2Q96Q27 587 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 KCNA7Q96RP8 456 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 C9orf16Q9BUW7 83 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 NMUR1Q9HB89 426 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 PLK2Q9NYY3 685 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 POLG2Q9UHN1 485 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 ANKRD31Q8N7Z5 1873 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 WNK3Q9BYP7 1800 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 F8W810 466 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 ITGA7Q13683 1181 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 CACHD1Q5VU97 1274 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 PAQR3Q6TCH7 311 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 TCF12Q99081 682 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 ASPSCR1Q9BZE9 553 aa15.45■□□□□ 0.06
AP4E1-202ENST00000558439 AGO1Q9UL18 857 aaKnown RBP15.45■□□□□ 0.06
AP4E1-202ENST00000558439 SF3B1O75533 1304 aaKnown RBP eCLIP15.45■□□□□ 0.069e-6■■■■■ 68.9
AP4E1-202ENST00000558439 RPP40O75818 363 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 HAPLN1P10915 354 aaPredicted RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 ITGALP20701 1170 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 RPS24P62847 133 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 VAC14Q08AM6 782 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 VARS2Q5ST30 1063 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 PRMT9Q6P2P2 845 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 SZRD1Q7Z422 152 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 BDH2Q9BUT1 245 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 PAIP1Q9H074 479 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 SH3BP1Q9Y3L3 701 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 JUNP05412 331 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 CLCQ05315 142 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 SIRPB2Q5JXA9 342 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 LRRTM3Q86VH5 581 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 OFCC1Q8IZS5 231 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 ITFG1Q8TB96 612 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 OSBPL11Q9BXB4 747 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 AKTIPQ9H8T0 292 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 LSM7Q9UK45 103 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 PTGDR2Q9Y5Y4 395 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 THSD7AQ9UPZ6 1657 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 LRRC14BA6NHZ5 514 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 SLC7A4O43246 635 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 RPL17P18621 184 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 LPOP22079 712 aaPredicted RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 GPRIN3Q6ZVF9 776 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 CENPLQ8N0S6 344 aaPredicted RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 GORASP1Q9BQQ3 440 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 MRPS26Q9BYN8 205 aaKnown RBP15.44■□□□□ 0.06
AP4E1-202ENST00000558439 ASB8Q9H765 288 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 GTF2IRD1Q9UHL9 959 aa15.44■□□□□ 0.06
AP4E1-202ENST00000558439 MYADML2A6NDP7 307 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 HNRNPRO43390 633 aaKnown RBP15.43■□□□□ 0.06
AP4E1-202ENST00000558439 CDH15P55291 814 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 KIAA0319Q5VV43 1072 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 TPGS1Q6ZTW0 290 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 NKAPQ8N5F7 415 aaKnown RBP15.43■□□□□ 0.06
AP4E1-202ENST00000558439 OR2T34Q8NGX1 318 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 OR2T3Q8NH03 318 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 TMEM169Q96HH4 297 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 PHF12Q96QT6 1004 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 PARVBQ9HBI1 364 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 A0A087WXM4 84 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 H7C4K7 107 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 SDHDO14521 159 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 MTHFD1P11586 935 aaKnown RBP15.43■□□□□ 0.06
AP4E1-202ENST00000558439 ADSLP30566 484 aaPredicted RBP15.43■□□□□ 0.06
AP4E1-202ENST00000558439 MS4A2Q01362 244 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 PRKG2Q13237 762 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 UROC1Q96N76 676 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 POLR1BQ9H9Y6 1135 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 DNMT3LQ9UJW3 386 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 RAB26Q9ULW5 256 aa15.43■□□□□ 0.06
AP4E1-202ENST00000558439 DEAF1O75398 565 aaPredicted RBP15.43■□□□□ 0.06
AP4E1-202ENST00000558439 ITGB1P05556 798 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms