RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PNCKQ6P2M8 343 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 MACC1Q6ZN28 852 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 RFLNAQ6ZTI6 216 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 LYSMD3Q7Z3D4 306 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 DGLUCYQ7Z3D6 616 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 GATAD2AQ86YP4 633 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 NAXDQ8IW45 347 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 PELI3Q8N2H9 469 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 RASGEF1CQ8N431 466 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 DEFB124Q8NES8 71 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 SETD7Q8WTS6 366 aaKnown RBP12.34□□□□□ -0.43
SMAD3-205ENST00000558428 RTP4Q96DX8 246 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 SRPK1Q96SB4 655 aaKnown RBP12.34□□□□□ -0.43
SMAD3-205ENST00000558428 FICDQ9BVA6 458 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 GPR63Q9BZJ6 419 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ABCG8Q9H221 673 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 SLC32A1Q9H598 525 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 WDR26Q9H7D7 661 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ZFYVE1Q9HBF4 777 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 MAGEE1Q9HCI5 957 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 DNAJC28Q9NX36 388 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 PKD2L2Q9NZM6 624 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ZKSCAN5Q9Y2L8 839 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 ZNF711Q9Y462 761 aa12.34□□□□□ -0.43
SMAD3-205ENST00000558428 SCN8AQ9UQD0 1980 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 H3BM21 787 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 CACNB4O00305 520 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 METTL18O95568 372 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 AGTP01019 485 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 FGF1P05230 155 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 TSHRP16473 764 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 CSRP1P21291 193 aaKnown RBP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 TRIM23P36406 574 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 GPR1P46091 355 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 SPINT3P49223 89 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 HNRNPKP61978 463 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 EIF2B5Q13144 721 aaKnown RBP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 P3H1Q32P28 736 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 INAVAQ3KP66 663 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 SIRPB2Q5JXA9 342 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 FAXCQ5TGI0 409 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 DRICH1Q6PGQ1 229 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 ENPP7Q6UWV6 458 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 DBX2Q6ZNG2 339 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 PIP4P1Q86T03 277 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 RAVER1Q8IY67 606 aaKnown RBP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 NRSN1Q8IZ57 195 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 TAB3Q8N5C8 712 aaPredicted RBP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 RHBDD1Q8TEB9 315 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 SAP25Q8TEE9 199 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 SCAMP4Q969E2 229 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 FUBP1Q96AE4 644 aaKnown RBP12.33□□□□□ -0.44
SMAD3-205ENST00000558428 LRRC45Q96CN5 670 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 AP2M1Q96CW1 435 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 MS4A14Q96JA4 679 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 CAMK1GQ96NX5 476 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 OSBPL9Q96SU4 736 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 SNX12Q9UMY4 172 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 SPO11Q9Y5K1 396 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 LRP4O75096 1905 aa12.33□□□□□ -0.44
SMAD3-205ENST00000558428 KCNK5O95279 499 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 CSF2P04141 144 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 NME1P15531 152 aaKnown RBP12.32□□□□□ -0.44
SMAD3-205ENST00000558428 JUNDP17535 347 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 ADRA1AP35348 466 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 GRK6P43250 576 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 KIAA1024LP59773 190 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 PPARDQ03181 441 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 DPTQ07507 201 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 OLIG2Q13516 323 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 SPARCL1Q14515 664 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 PPM1JQ5JR12 505 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 ZNF765Q7L2R6 523 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 TMC3Q7Z5M5 1100 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 HEATR4Q86WZ0 1026 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 PHACTR4Q8IZ21 702 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 CCDC89Q8N998 374 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 ATL2Q8NHH9 583 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 BLOC1S5Q8TDH9 187 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 COG1Q8WTW3 980 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 EID2BQ96D98 161 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 WDR92Q96MX6 357 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 NAP1L3Q99457 506 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-205ENST00000558428 TBL1YQ9BQ87 522 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 APOL2Q9BQE5 337 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 RIOK2Q9BVS4 552 aaKnown RBP12.32□□□□□ -0.44
SMAD3-205ENST00000558428 FAM83DQ9H4H8 585 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 CAAP1Q9H8G2 361 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 PHPT1Q9NRX4 125 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-205ENST00000558428 HOMER3Q9NSC5 361 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 KLQ9UEF7 1012 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 KLF15Q9UIH9 416 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 PCOLCE2Q9UKZ9 415 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 PNMA8BQ9ULN7 279 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-205ENST00000558428 TTC7AQ9ULT0 858 aaPredicted RBP12.32□□□□□ -0.44
SMAD3-205ENST00000558428 DRG1Q9Y295 367 aaKnown RBP12.32□□□□□ -0.44
SMAD3-205ENST00000558428 BTBD3Q9Y2F9 522 aa12.32□□□□□ -0.44
SMAD3-205ENST00000558428 RGSL1A5PLK6 1076 aa12.31□□□□□ -0.44
SMAD3-205ENST00000558428 PGRMC1O00264 195 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms