RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RFX6Q8HWS3 928 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 SLC35F3Q8IY50 421 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 FSTL5Q8N475 847 aaPredicted RBP8.78□□□□□ -1
SNRPA1-206ENST00000558059 DCBLD1Q8N8Z6 715 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 ATL2Q8NHH9 583 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 IFI44Q8TCB0 444 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 NUS1Q96E22 293 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 PDXPQ96GD0 296 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 ZNF830Q96NB3 372 aaPredicted RBP8.78□□□□□ -1
SNRPA1-206ENST00000558059 OLFM3Q96PB7 478 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 RBM15Q96T37 977 aaKnown RBP eCLIP8.78□□□□□ -1
SNRPA1-206ENST00000558059 TDRD1Q9BXT4 1180 aaKnown RBP8.78□□□□□ -1
SNRPA1-206ENST00000558059 MAK16Q9BXY0 300 aaKnown RBP8.78□□□□□ -1
SNRPA1-206ENST00000558059 FGF22Q9HCT0 170 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 KCTD5Q9NXV2 234 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 DDX56Q9NY93 547 aaKnown RBP8.78□□□□□ -1
SNRPA1-206ENST00000558059 NCKIPSDQ9NZQ3 722 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 KLQ9UEF7 1012 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 CLCA2Q9UQC9 943 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 CHKBQ9Y259 395 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 EPN1Q9Y6I3 576 aaPredicted RBP8.78□□□□□ -1
SNRPA1-206ENST00000558059 DGKBQ9Y6T7 804 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 PTPRQQ9UMZ3 2332 aa8.78□□□□□ -1
SNRPA1-206ENST00000558059 AHCTF1Q8WYP5 2266 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 CPED1A4D0V7 1026 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 SOWAHDA6NJG2 315 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 CACNB4O00305 520 aaPredicted RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 LCE2BO14633 110 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 PSTPIP1O43586 416 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TNFP01375 233 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 FUCA1P04066 466 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 KRT10P13645 584 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 CTSEP14091 401 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TEAD1P28347 426 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 CYLC1P35663 651 aaPredicted RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 CD86P42081 329 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 STC1P52823 247 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 RPL26P61254 145 aaKnown RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 SKOR1P84550 965 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 DPTQ07507 201 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 ADCY2Q08462 1091 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 ARHGEF7Q14155 803 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 RTP5Q14D33 572 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 PDK1Q15118 436 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 LLGL1Q15334 1064 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 ELOCQ15369 112 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 NR0B2Q15466 257 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 SPA17Q15506 151 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TCEA2Q15560 299 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 CDKN3Q16667 212 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 LRRC66Q68CR7 880 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 LVRNQ6Q4G3 990 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 USP45Q70EL2 814 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 B4GALNT4Q76KP1 1039 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 NLRP8Q86W28 1048 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 HEATR4Q86WZ0 1026 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TMTC1Q8IUR5 882 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 NDUFAF2Q8N183 169 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 SDR16C5Q8N3Y7 309 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 OR56A4Q8NGH8 313 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TEX101Q9BY14 249 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TMEM168Q9H0V1 697 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 ABCG8Q9H221 673 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 WDR26Q9H7D7 661 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 PCDH9Q9HC56 1237 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 MRPL40Q9NQ50 206 aaKnown RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 EVA1BQ9NVM1 165 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 SAE1Q9UBE0 346 aaPredicted RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 RPL26L1Q9UNX3 145 aaKnown RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 REXO2Q9Y3B8 237 aaKnown RBP8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 TTLL3Q9Y4R7 772 aa8.77□□□□□ -1.01
SNRPA1-206ENST00000558059 CAPN8A6NHC0 703 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 ANKRD66B4E2M5 251 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 PDE2AO00408 941 aaPredicted RBP8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 PPP1R12AO14974 1030 aaPredicted RBP8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 CASC3O15234 703 aaKnown RBP8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 CST8O60676 142 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 NDUFA10O95299 355 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 CLDN7O95471 211 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 SOD1P00441 154 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 CEACAM5P06731 702 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 MYCLP1P12525 358 aaPredicted RBP8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 ZNF30P17039 623 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 TGM2P21980 687 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 KELP23276 732 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 MARCKSL1P49006 195 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 NR2C2P49116 596 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 RPIAP49247 311 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 EPHB1P54762 984 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 DYNLT1P63172 113 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 CDK3Q00526 305 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 AP1B1Q10567 949 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 TFDP2Q14188 446 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 QPCTQ16769 361 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 ODF2Q5BJF6 829 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 PERM1Q5SV97 790 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 C11orf63Q6NUN7 778 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 OGFOD3Q6PK18 319 aa8.76□□□□□ -1.01
SNRPA1-206ENST00000558059 RAD9BQ6WBX8 426 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms