RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 USP30Q70CQ3 517 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 MARK2Q7KZI7 788 aaKnown RBP16.85■□□□□ 0.29
SNX1-203ENST00000558040 KBTBD6Q86V97 674 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 RAVER1Q8IY67 606 aaKnown RBP16.85■□□□□ 0.29
SNX1-203ENST00000558040 UNC5BQ8IZJ1 945 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 CBARPQ8N350 705 aaPredicted RBP16.85■□□□□ 0.29
SNX1-203ENST00000558040 RIBC1Q8N443 379 aaPredicted RBP16.85■□□□□ 0.29
SNX1-203ENST00000558040 OTUD6BQ8N6M0 293 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 PPM1NQ8N819 430 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 TBATAQ96M53 351 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 PAFAH2Q99487 392 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 CDH19Q9H159 772 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 BPIFA1Q9NP55 256 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 CD320Q9NPF0 282 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 FBXL12Q9NXK8 326 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 APPL1Q9UKG1 709 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 NCKAP1Q9Y2A7 1128 aa16.85■□□□□ 0.29
SNX1-203ENST00000558040 A0A0U1RQS6 177 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 A0A1W2PP55 124 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 CCDC162PA2VCL2 907 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 RGSL1A5PLK6 1076 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 SMIM23A6NLE4 172 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 PLK4O00444 970 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 TSPAN6O43657 245 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 CDH16O75309 829 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 GOT2P00505 430 aaKnown RBP16.84■□□□□ 0.29
SNX1-203ENST00000558040 C1QAP02745 245 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 C1SP09871 688 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 MYZAPP0CAP1 466 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 SPAM1P38567 509 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 RPS9P46781 194 aaKnown RBP16.84■□□□□ 0.29
SNX1-203ENST00000558040 SEMG2Q02383 582 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 PTSQ03393 145 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 FZD5Q13467 585 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 RASA2Q15283 850 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 TMEM52BQ4KMG9 183 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 AGBL4Q5VU57 503 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 MRNIPQ6NTE8 343 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 KIAA1324Q6UXG2 1013 aaKnown RBP16.84■□□□□ 0.29
SNX1-203ENST00000558040 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.84■□□□□ 0.29
SNX1-203ENST00000558040 LIPIQ6XZB0 460 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 TAOK1Q7L7X3 1001 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 SLC26A11Q86WA9 606 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 TDRPQ86YL5 185 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 CNTN4Q8IWV2 1026 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 OR4L1Q8NH43 312 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 EPS8L3Q8TE67 593 aaKnown RBP16.84■□□□□ 0.29
SNX1-203ENST00000558040 CXorf40AQ8TE69 158 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 SLC44A1Q8WWI5 657 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.84■□□□□ 0.29
SNX1-203ENST00000558040 CLDN23Q96B33 292 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 EID2BQ96D98 161 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 SGSM3Q96HU1 749 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 MRGPRX1Q96LB2 322 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 PLEKHG4BQ96PX9 1271 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 CPNE1Q99829 537 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 IER2Q9BTL4 223 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 SMYD2Q9NRG4 433 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 IARS2Q9NSE4 1012 aaKnown RBP16.84■□□□□ 0.29
SNX1-203ENST00000558040 CATSPERZQ9NTU4 200 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 IL1RAPL1Q9NZN1 696 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 PSMC3IPQ9P2W1 217 aaPredicted RBP16.84■□□□□ 0.29
SNX1-203ENST00000558040 FKBPLQ9UIM3 349 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 FZD4Q9ULV1 537 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 ITM2BQ9Y287 266 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 FADS3Q9Y5Q0 445 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 SLC30A1Q9Y6M5 507 aa16.84■□□□□ 0.29
SNX1-203ENST00000558040 TLDC2A0PJX2 215 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 CXorf49A8MYA2 514 aaPredicted RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 CCL22O00626 93 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 SPINT1O43278 529 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 BPIP17213 487 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 GABRG2P18507 467 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 NDUFV2P19404 249 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 MC4RP32245 332 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 MAGEA9P43362 315 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 SLCO1A2P46721 670 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 SPINT3P49223 89 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 LIG3P49916 1009 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 SIGLEC14Q08ET2 396 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 ILF2Q12905 390 aaKnown RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 SMAD1Q15797 465 aaKnown RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 FASTKD1Q53R41 847 aaKnown RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 AARS2Q5JTZ9 985 aaKnown RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 TEDDM1Q5T9Z0 273 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 ZNF470Q6ECI4 717 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 KIAA0408Q6ZU52 694 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 PTAR1Q7Z6K3 402 aaPredicted RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 SDCCAG8Q86SQ7 713 aaPredicted RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 FLCNQ8NFG4 579 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 TSTD1Q8NFU3 115 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 GPR150Q8NGU9 434 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 SCG3Q8WXD2 468 aaKnown RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 FAM131CQ96AQ9 280 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 ATG2BQ96BY7 2078 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 MRRFQ96E11 262 aaKnown RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 DHRS4Q9BTZ2 278 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 WRAP53Q9BUR4 548 aaKnown RBP16.83■□□□□ 0.28
SNX1-203ENST00000558040 CHRDQ9H2X0 955 aa16.83■□□□□ 0.28
SNX1-203ENST00000558040 BCCIPQ9P287 314 aaKnown RBP eCLIP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms