RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LCMT1Q9UIC8 334 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 DNPEPQ9ULA0 475 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 ATXN7L1Q9ULK2 861 aaPredicted RBP13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 LUC7L2Q9Y383 392 aaKnown RBP13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 RNF215Q9Y6U7 377 aa13.6□□□□□ -0.23
SNRPA1-204ENST00000558020 ATMQ13315 3056 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 CPNE6O95741 557 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 CYP1A2P05177 515 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 CEACAM5P06731 702 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 GM2AP17900 193 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 ALDH4A1P30038 563 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 ETV3P41162 512 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 GPR3P46089 330 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 GPR1P46091 355 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 GNPDA1P46926 289 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 EPHB1P54762 984 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 MAXP61244 160 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 CDK3Q00526 305 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 FANCCQ00597 558 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 ZFP36L1Q07352 338 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 CLN3Q13286 438 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 PHF19Q5T6S3 580 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 HGSNATQ68CP4 663 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 RAET1GQ6H3X3 334 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 ALKBH5Q6P6C2 394 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 Q6ZVL8 140 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 HSD11B1LQ7Z5J1 315 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 KCTD6Q8NC69 237 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 ZDHHC1Q8WTX9 485 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 CPLX3Q8WVH0 158 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 MCCC1Q96RQ3 725 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 SEMA3CQ99985 751 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 SUDS3Q9H7L9 328 aaPredicted RBP13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 NT5MQ9NPB1 228 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 SPATS2LQ9NUQ6 558 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 PISDQ9UG56 409 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 AMACRQ9UHK6 382 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 ACSL6Q9UKU0 697 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 CAPN11Q9UMQ6 739 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 PPIL1Q9Y3C6 166 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 LOXL2Q9Y4K0 774 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 UNC13CQ8NB66 2214 aa13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 HELZ2Q9BYK8 2649 aaKnown RBP13.59□□□□□ -0.23
SNRPA1-204ENST00000558020 PMS2P1A4D2B8 440 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 NPIPB15A6NHN6 443 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 CASC3O15234 703 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 C1QL1O75973 258 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 FGF1P05230 155 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 TPM3P06753 285 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 IVLP07476 585 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 TCF4P15884 667 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNF30P17039 623 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 TRAF2Q12933 501 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 PDK2Q15119 407 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 IFI16Q16666 785 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 MAP9Q49MG5 647 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 KCTD16Q68DU8 428 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 XKR5Q6UX68 686 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 NYAP1Q6ZVC0 841 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 USP53Q70EK8 1073 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 NLRP8Q86W28 1048 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 RAVER1Q8IY67 606 aaKnown RBP13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 TEX26Q8N6G2 289 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 ZSCAN1Q8NBB4 408 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 CCL4L1Q8NHW4 92 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 AP2M1Q96CW1 435 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 NSMCE3Q96MG7 304 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 FRMD8Q9BZ67 464 aaPredicted RBP13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 B3GNT4Q9C0J1 378 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 CDH19Q9H159 772 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 TAAR2Q9P1P5 351 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 SUFUQ9UMX1 484 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 SLC17A4Q9Y2C5 497 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 KIF26BQ2KJY2 2108 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 LRP4O75096 1905 aa13.58□□□□□ -0.24
SNRPA1-204ENST00000558020 COL27A1Q8IZC6 1860 aaPredicted RBP13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 A0A087X0T9 212 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 MATN3O15232 486 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 KRT7P08729 469 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 FAM228BP0C875 321 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 LIPCP11150 499 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 CTPS1P17812 591 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 MX2P20592 715 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 LHCGRP22888 699 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 CCNCP24863 283 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 CD82P27701 267 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 RPL26P61254 145 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 B4GALNT1Q00973 533 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 SLC25A11Q02978 314 aaKnown RBP13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 GALNT2Q10471 571 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 AMZ1Q400G9 498 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 ZFYVE27Q5T4F4 411 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 TXNRD3NBQ6F5E7 133 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 SLC30A9Q6PML9 568 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 ADAMTSL4Q6UY14 1074 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 ZNF765Q7L2R6 523 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 TECPR1Q7Z6L1 1165 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 NRSN1Q8IZ57 195 aa13.57□□□□□ -0.24
SNRPA1-204ENST00000558020 PELI3Q8N2H9 469 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms