RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 ESRP1Q6NXG1 681 aaKnown RBP14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 KYAT3Q6YP21 454 aaKnown RBP14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 RGL4Q8IZJ4 473 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 TTC30BQ8N4P2 665 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 MFSD2AQ8NA29 543 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 C1orf216Q8TAB5 229 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 BLOC1S5Q8TDH9 187 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 STYXQ8WUJ0 223 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 SEC14L1Q92503 715 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 CENPTQ96BT3 561 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 LRRC39Q96DD0 335 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 NUS1Q96E22 293 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 SERAC1Q96JX3 654 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 ORAI3Q9BRQ5 295 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 NAT9Q9BTE0 207 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 ZSCAN5AQ9BUG6 496 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 GGT7Q9UJ14 662 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 APPL1Q9UKG1 709 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 PIKFYVEQ9Y2I7 2098 aa14.1□□□□□ -0.15
SUPT16H-208ENST00000557652 A6NNZ2 444 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 H7C0S8 307 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 BCAT2O15382 392 aaPredicted RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 STX7O15400 261 aaKnown RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 CLDN7O95471 211 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 PAK4O96013 591 aaPredicted RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 PTGER3P43115 390 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 MAGEA3P43357 314 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 RABIFP47224 123 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 SPARCL1Q14515 664 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 SKIDA1Q1XH10 827 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 DNAJC21Q5F1R6 531 aaKnown RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 PCID2Q5JVF3 399 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 IZUMO3Q5VZ72 239 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 HIBCHQ6NVY1 386 aaPredicted RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 CEP128Q6ZU80 1094 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 LYSMD3Q7Z3D4 306 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 ABI3BPQ7Z7G0 1075 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 PRUNE1Q86TP1 453 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 TSPAN33Q86UF1 283 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 CCNJLQ8IV13 435 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 PDIK1LQ8N165 341 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 GPR161Q8N6U8 529 aaKnown RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 OR52K1Q8NGK4 314 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 SNX19Q92543 992 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 KLF6Q99612 283 aaPredicted RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 ZDHHC5Q9C0B5 715 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 TSPYL1Q9H0U9 437 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 FAM83DQ9H4H8 585 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 IL17CQ9P0M4 197 aa14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 EIF2B4Q9UI10 523 aaKnown RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 EP300Q09472 2414 aaPredicted RBP14.09□□□□□ -0.15
SUPT16H-208ENST00000557652 MROH6A6NGR9 719 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 SDR42E2A6NKP2 422 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 VILLO15195 856 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 SLC31A1O15431 190 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 DFNA5O60443 496 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 USP12O75317 370 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 PRKCGP05129 697 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 C1SP09871 688 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 KELP23276 732 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 CD38P28907 300 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 MAT2AP31153 395 aaKnown RBP14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 TRIM23P36406 574 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 ITGA9Q13797 1035 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 HENMT1Q5T8I9 393 aaKnown RBP14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 SLC23A3Q6PIS1 610 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 IL27RAQ6UWB1 636 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 HSD11B1LQ7Z5J1 315 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 OXR1Q8N573 874 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 TP53I13Q8NBR0 393 aaPredicted RBP14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 PPHLN1Q8NEY8 458 aaKnown RBP14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 RUBCNQ92622 972 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 AP2M1Q96CW1 435 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 SGSM3Q96HU1 749 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 SERPINB12Q96P63 405 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 APOL2Q9BQE5 337 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 TRIM51Q9BSJ1 452 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 CARD6Q9BX69 1037 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 FAM114A2Q9NRY5 505 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 ANAPC5Q9UJX4 755 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 SPO11Q9Y5K1 396 aa14.08□□□□□ -0.16
SUPT16H-208ENST00000557652 ZFC3H1O60293 1989 aaKnown RBP14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 EIF3HO15372 352 aaKnown RBP eCLIP14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 LDB2O43679 373 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 TMEM63AO94886 807 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 GM2AP17900 193 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 ITPKAP23677 461 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 SPAM1P38567 509 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 ETV3P41162 512 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 ZNF140P52738 457 aaPredicted RBP14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 PTK2BQ14289 1009 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 FGL2Q14314 439 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 WSCD2Q2TBF2 565 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 ADAMTSL4Q6UY14 1074 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 Q6ZVL8 140 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 ZNF534Q76KX8 674 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 TAB3Q8N5C8 712 aaPredicted RBP14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 TRAM1L1Q8N609 369 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 KIFC1Q9BW19 673 aa14.07□□□□□ -0.16
SUPT16H-208ENST00000557652 TM9SF3Q9HD45 589 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms