RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 N4BP2L1Q5TBK1 243 aaPredicted RBP12.49□□□□□ -0.41
SLIRP-211ENST00000557623 LRRC66Q68CR7 880 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 PNCKQ6P2M8 343 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 KANSL1Q7Z3B3 1105 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 HSD11B1LQ7Z5J1 315 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 TSPAN33Q86UF1 283 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 NRSN1Q8IZ57 195 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 SPATA22Q8NHS9 363 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 CCHCR1Q8TD31 782 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 TBATAQ96M53 351 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 PPP1R2P1Q96PQ5 205 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 TRIB3Q96RU7 358 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 FTSJ1Q9UET6 329 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 RSPH14Q9UHP6 348 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 BTBD3Q9Y2F9 522 aa12.49□□□□□ -0.41
SLIRP-211ENST00000557623 C1orf232A0A0U1RR37 186 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 SPAARA0A1B0GVQ0 90 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 KCNN4O15554 427 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 ZSCAN12O43309 604 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 TNFSF14O43557 240 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 SDC3O75056 442 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 PMPCBO75439 489 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 ANXA9O76027 345 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 TRIM16O95361 564 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 LDOC1O95751 146 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 NDST3O95803 873 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 MT-CYBP00156 380 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 EPOP01588 193 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 ALPPL2P10696 532 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 TEAD1P28347 426 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 TRIM23P36406 574 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 ETV3P41162 512 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 STC1P52823 247 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 GEMP55040 296 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 KIAA1024LP59773 190 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 PPARDQ03181 441 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 PTSQ03393 145 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 DPTQ07507 201 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 EIF2B5Q13144 721 aaKnown RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 KLF1Q13351 362 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 GALNT3Q14435 633 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 ZNF542PQ5EBM4 170 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 FAXCQ5TGI0 409 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 ENPP7Q6UWV6 458 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 Q6ZVL8 140 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 ZNF765Q7L2R6 523 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 TECPR1Q7Z6L1 1165 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 NLRP8Q86W28 1048 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 PLA2G15Q8NCC3 412 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 WDR92Q96MX6 357 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 DUSP23Q9BVJ7 150 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 FRMD8P1Q9BZ68 369 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 GBA3Q9H227 469 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 CARD9Q9H257 536 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 WDR26Q9H7D7 661 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 MAGEE1Q9HCI5 957 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 PHPT1Q9NRX4 125 aaPredicted RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 PKD2L2Q9NZM6 624 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 SPASTQ9UBP0 616 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 APOBEC2Q9Y235 224 aaKnown RBP12.48□□□□□ -0.41
SLIRP-211ENST00000557623 OR1A2Q9Y585 309 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 CSNK1G3Q9Y6M4 447 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 SCN8AQ9UQD0 1980 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 DNAH14Q0VDD8 3507 aa12.48□□□□□ -0.41
SLIRP-211ENST00000557623 RGSL1A5PLK6 1076 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 GOLGA6CA6NDK9 693 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 GOLGA6BA6NDN3 693 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 RASGRP1O95267 797 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 CLDN7O95471 211 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 C1SP09871 688 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 GOLGA6DP0CG33 693 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 WNT3AP56704 352 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 PTPRRQ15256 657 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 CDKN3Q16667 212 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 ANKRD20A2Q5SQ80 823 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 TPRG1LQ5T0D9 272 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 FAM182AQ5T1J6 154 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 ANKRD20A1Q5TYW2 823 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 ANKRD20A3Q5VUR7 823 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 RAET1GQ6H3X3 334 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 KDELC1Q6UW63 502 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 KDM7AQ6ZMT4 941 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 KDELC2Q7Z4H8 507 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 PHACTR4Q8IZ21 702 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 SLC25A45Q8N413 288 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 FUBP1Q96AE4 644 aaKnown RBP12.47□□□□□ -0.41
SLIRP-211ENST00000557623 LRRC45Q96CN5 670 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 AP2M1Q96CW1 435 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 CNDP2Q96KP4 475 aaKnown RBP12.47□□□□□ -0.41
SLIRP-211ENST00000557623 SPATA13Q96N96 652 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 C10orf88Q9H8K7 445 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 ZFYVE1Q9HBF4 777 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 RAD18Q9NS91 495 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 EVA1BQ9NVM1 165 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 GOLGA6AQ9NYA3 693 aa12.47□□□□□ -0.41
SLIRP-211ENST00000557623 NLGN3Q9NZ94 848 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms