RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 PACSIN1Q9BY11 444 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 POLR1EQ9GZS1 481 aaKnown RBP10.59□□□□□ -0.71
PSMC6-215ENST00000557517 PRORYQ9H606 182 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 FGF22Q9HCT0 170 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 CTTNBP2NLQ9P2B4 639 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 APPL1Q9UKG1 709 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 PCDHB3Q9Y5E6 796 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 PCDHGA8Q9Y5G5 932 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 ENTPD2Q9Y5L3 495 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 MGAQ8IWI9 3026 aa10.59□□□□□ -0.71
PSMC6-215ENST00000557517 NPIPB15A6NHN6 443 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 ZNF487B1APH4 448 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 CASC3O15234 703 aaKnown RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 PRLP01236 227 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 CEACAM5P06731 702 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 CYP2A6P11509 494 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 KDELR1P24390 212 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 ARHGAP25P42331 645 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 SKOR1P84550 965 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 SLC10A2Q12908 348 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 TRIM14Q14142 442 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 TCEAL1Q15170 157 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 PTPRRQ15256 657 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 IFI16Q16666 785 aaKnown RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 ARMC12Q5T9G4 340 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 TIGD7Q6NT04 549 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 RBM44Q6ZP01 1051 aaKnown RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 Q6ZVL8 140 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 HSD11B1LQ7Z5J1 315 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 C17orf82Q86X59 251 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 VSIG1Q86XK7 387 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 VSTM4Q8IW00 320 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 NDUFAF2Q8N183 169 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 SLC35G2Q8TBE7 412 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 ARRDC2Q8TBH0 407 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 GPBAR1Q8TDU6 330 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 PDCD6IPQ8WUM4 868 aaKnown RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 CTNNBL1Q8WYA6 563 aaPredicted RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 DTD2Q96FN9 168 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 PDXPQ96GD0 296 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 CHP1Q99653 195 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 SEMA3CQ99985 751 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 TMEM168Q9H0V1 697 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 WDR26Q9H7D7 661 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 ASCL3Q9NQ33 180 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 MRPL40Q9NQ50 206 aaKnown RBP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 RBM22Q9NW64 420 aaKnown RBP eCLIP10.58□□□□□ -0.72
PSMC6-215ENST00000557517 GULP1Q9UBP9 304 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 GPR34Q9UPC5 381 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 DOLKQ9UPQ8 538 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 RAI2Q9Y5P3 530 aa10.58□□□□□ -0.72
PSMC6-215ENST00000557517 A0A0J9YYE9 177 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 A0A1W2PQM1 296 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 NOBOXO60393 691 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 MTA2O94776 668 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 CPP00450 1065 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 TRBC1P01850 177 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 CCNB1P14635 433 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 GLB1P16278 677 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 MX2P20592 715 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 ETV3P41162 512 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 MLLT3P42568 568 aaPredicted RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 SSR1P43307 286 aaKnown RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 PDX1P52945 283 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 RPL26P61254 145 aaKnown RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 GABREP78334 506 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 TLE3Q04726 772 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 CRTC1Q6UUV9 634 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 USP45Q70EL2 814 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 ZNF843Q8N446 348 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 PAF1Q8N7H5 531 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 ZNF248Q8NDW4 579 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 FAM46DQ8NEK8 389 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 CCL4L1Q8NHW4 92 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 RAPGEF5Q92565 580 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 NUS1Q96E22 293 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 SCARF2Q96GP6 870 aaPredicted RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 ATXN7L3BQ96GX2 97 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 LYSMD1Q96S90 227 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 NT5MQ9NPB1 228 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 ABHD10Q9NUJ1 306 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 ZNHIT6Q9NWK9 470 aaKnown RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 TRNAU1APQ9NX07 287 aaKnown RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 RPL26L1Q9UNX3 145 aaKnown RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 SLC17A4Q9Y2C5 497 aa10.57□□□□□ -0.72
PSMC6-215ENST00000557517 NYNRINQ9P2P1 1898 aaKnown RBP10.57□□□□□ -0.72
PSMC6-215ENST00000557517 ARID1BQ8NFD5 2236 aaPredicted RBP10.56□□□□□ -0.72
PSMC6-215ENST00000557517 PRSS38A1L453 326 aa10.56□□□□□ -0.72
PSMC6-215ENST00000557517 C3orf70A6NLC5 250 aaPredicted RBP10.56□□□□□ -0.72
PSMC6-215ENST00000557517 CDRT15L2A8MXV6 281 aa10.56□□□□□ -0.72
PSMC6-215ENST00000557517 TMX2-CTNND1H3BSU7 103 aa10.56□□□□□ -0.72
PSMC6-215ENST00000557517 NUDT21O43809 227 aaKnown RBP10.56□□□□□ -0.72
PSMC6-215ENST00000557517 MFSD11O43934 449 aa10.56□□□□□ -0.72
PSMC6-215ENST00000557517 AKR1B10O60218 316 aa10.56□□□□□ -0.72
PSMC6-215ENST00000557517 SOD1P00441 154 aa10.56□□□□□ -0.72
PSMC6-215ENST00000557517 FGF1P05230 155 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms