RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SRP54P61011 504 aaKnown RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 SLC6A3Q01959 620 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 APBA1Q02410 837 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 GNA12Q03113 381 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 KLHL40Q2TBA0 621 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 PTPN20Q4JDL3 420 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 CERCAMQ5T4B2 595 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ATXN7L2Q5T6C5 722 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 TTI2Q6NXR4 508 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 BORAQ6PGQ7 559 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 LRRC31Q6UY01 552 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF783Q6ZMS7 281 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 LEKR1Q6ZMV7 388 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 RD3Q7Z3Z2 195 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 SPRED1Q7Z699 444 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 GKN2Q86XP6 184 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 SFTPA2Q8IWL1 248 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 HSCBQ8IWL3 235 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 TRIM59Q8IWR1 403 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 RYBPQ8N488 228 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 AFAP1L2Q8N4X5 818 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 GOLM1Q8NBJ4 401 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 PHC3Q8NDX5 983 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF397Q8NF99 534 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 GPR156Q8NFN8 814 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 SPATA20Q8TB22 786 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 CXorf40AQ8TE69 158 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 JPH3Q8WXH2 748 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ARHGEF2Q92974 986 aaKnown RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 NT5C3BQ969T7 300 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ISG20Q96AZ6 181 aaKnown RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ZNF669Q96BR6 464 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ARHGEF26Q96DR7 871 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 PGAP3Q96FM1 320 aaPredicted RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 CCDC34Q96HJ3 373 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 C1orf74Q96LT6 269 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 KLHL32Q96NJ5 620 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 FERD3LQ96RJ6 166 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 TBCBQ99426 244 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 SMAD5Q99717 465 aaKnown RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 CMKLR1Q99788 373 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 WRAP53Q9BUR4 548 aaKnown RBP5.9□□□□□ -1.46
VPS33B-207ENST00000557470 C1QTNF7Q9BXJ2 289 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 SLC12A9Q9BXP2 914 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 EDEM3Q9BZQ6 932 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 PHACTR1Q9C0D0 580 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ADNPQ9H2P0 1102 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 APPL1Q9UKG1 709 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 MAN2B2Q9Y2E5 1009 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 COQ6Q9Y2Z9 468 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 DAAM1Q9Y4D1 1078 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 RNF215Q9Y6U7 377 aa5.9□□□□□ -1.46
VPS33B-207ENST00000557470 ZFC3H1O60293 1989 aaKnown RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 TEP1Q99973 2627 aaKnown RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 UNC13CQ8NB66 2214 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ITPR2Q14571 2701 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 FAM170AA1A519 330 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM110-MUSTN1A8MSY1 372 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 B4DGG1 531 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 STMND1H3BQB6 276 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 GNB5O14775 395 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SMC2O95347 1197 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 POP4O95707 220 aaKnown RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 GSRP00390 522 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 PF4P02776 101 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 CCL4P13236 92 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 GLB1P16278 677 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 CD82P27701 267 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 CASRP41180 1078 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 CASP2P42575 452 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 PPM1FP49593 454 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 PEX5P50542 639 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ARSDP51689 593 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 DEUP1Q05D60 604 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ITKQ08881 620 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 KCNAB2Q13303 367 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 STIM1Q13586 685 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 NFATC4Q14934 902 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 C16orf72Q14CZ0 275 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 LRRC14Q15048 493 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 POLD3Q15054 466 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ARHGAP44Q17R89 818 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 WSCD2Q2TBF2 565 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 MYLK3Q32MK0 819 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SLC25A52Q3SY17 297 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 PHF19Q5T6S3 580 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ISM2Q6H9L7 571 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 KLHL10Q6JEL2 608 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ERAP2Q6P179 960 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 TRIM65Q6PJ69 517 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 ENOSF1Q7L5Y1 443 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SYT9Q86SS6 491 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 TTC7BQ86TV6 843 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 FMR1NBQ8N0W7 255 aaPredicted RBP5.89□□□□□ -1.47
VPS33B-207ENST00000557470 OR6C4Q8NGE1 309 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 OR2AP1Q8NGE2 309 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 SMARCE1Q969G3 411 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
VPS33B-207ENST00000557470 TMEM159Q96B96 161 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms