RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 PAGE1O75459 146 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 POP4O95707 220 aaKnown RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 GSRP00390 522 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 HOXC4P09017 264 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 FGF5P12034 268 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 FOSL1P15407 271 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 XPAP23025 273 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 DNAJA1P31689 397 aaKnown RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 CA5AP35218 305 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 SLC20A2Q08357 652 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 ELP6Q0PNE2 266 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 NFATC2Q13469 925 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 ATP1A4Q13733 1029 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 IL11RAQ14626 422 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 AGERQ15109 404 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 MYLK3Q32MK0 819 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 IGFL3Q6UXB1 125 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 BEND5Q7L4P6 421 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 SLC9A9Q8IVB4 645 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 TMEM102Q8N9M5 508 aaPredicted RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 NRGNQ92686 78 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 ISG20Q96AZ6 181 aaKnown RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 HMCESQ96FZ2 354 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 FOXC2Q99958 501 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 SLX1AQ9BQ83 275 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 ZSWIM1Q9BR11 485 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 TNMDQ9H2S6 317 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 POPDC2Q9HBU9 364 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 PCDH12Q9NPG4 1184 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 ST7Q9NRC1 585 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 NDFIP2Q9NV92 336 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 TRNAU1APQ9NX07 287 aaKnown RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 MPP6Q9NZW5 540 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 SUFUQ9UMX1 484 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 NOVA2Q9UNW9 492 aaKnown RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 FARSAQ9Y285 508 aaKnown RBP9.36□□□□□ -0.91
NEDD1-211ENST00000557454 ANKRD36A6QL64 1941 aa9.36□□□□□ -0.91
NEDD1-211ENST00000557454 TRGV8A0A0C4DH27 118 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 H3BQV1 296 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 TEX33O43247 280 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 BUB1BO60566 1050 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-211ENST00000557454 CALCAP01258 141 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 NR3C1P04150 777 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 ALPPP05187 535 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 CEACAM5P06731 702 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 OR1E1P30953 314 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 TRIM23P36406 574 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 VAV2P52735 878 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 SNRPD1P62314 119 aaKnown RBP9.35□□□□□ -0.91
NEDD1-211ENST00000557454 HHEXQ03014 270 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 CDSNQ15517 529 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.35□□□□□ -0.91
NEDD1-211ENST00000557454 MED25Q71SY5 747 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 CENPQQ7L2Z9 268 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-211ENST00000557454 BIVMQ86UB2 503 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 PPP1R3BQ86XI6 285 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 SFRP1Q8N474 314 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 ZADH2Q8N4Q0 377 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 ARFGAP1Q8N6T3 406 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 ARHGEF2Q92974 986 aaKnown RBP9.35□□□□□ -0.91
NEDD1-211ENST00000557454 FAXDC2Q96IV6 333 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 C9orf72Q96LT7 481 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 SPOCK3Q9BQ16 436 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 TRIM62Q9BVG3 475 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 ZBTB20Q9HC78 741 aaPredicted RBP9.35□□□□□ -0.91
NEDD1-211ENST00000557454 SERTAD1Q9UHV2 236 aa9.35□□□□□ -0.91
NEDD1-211ENST00000557454 AKAP6Q13023 2319 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 ILVBLA1L0T0 632 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 CCL21O00585 134 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 FANCGO15287 622 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 THAP12O43422 761 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 JRKO75564 520 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 RECQL5O94762 991 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 EML2O95834 649 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 MYCLP1P12525 358 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 BRD2P25440 801 aaKnown RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 CASP1P29466 404 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 MMP12P39900 470 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 ADCY8P40145 1251 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 PBX1P40424 430 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 RRADP55042 308 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 CDK17Q00537 523 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 PEX6Q13608 980 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 POLD3Q15054 466 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 TAF5Q15542 800 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 DMRTA1Q5VZB9 504 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 PWWP2BQ6NUJ5 590 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 LEKR1Q6ZMV7 388 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 PLXDC1Q8IUK5 500 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 ZNF683Q8IZ20 524 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 CBARPQ8N350 705 aaPredicted RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 GUF1Q8N442 669 aaKnown RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 ZBTB2Q8N680 514 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 NUDT8Q8WV74 236 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 TM9SF4Q92544 642 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 MTFMTQ96DP5 389 aaKnown RBP9.34□□□□□ -0.91
NEDD1-211ENST00000557454 ARSGQ96EG1 525 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 SGSM3Q96HU1 749 aa9.34□□□□□ -0.91
NEDD1-211ENST00000557454 TMEM8AQ9HCN3 771 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms