RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 H3BMQ9 156 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 PTGESO14684 152 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 AURKAO14965 403 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 NPPAP01160 153 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 JUNBP17275 347 aaPredicted RBP16.27■□□□□ 0.19
SHMT2-231ENST00000557433 SMPD1P17405 629 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 TMBIM6P55061 237 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 TNK2Q07912 1038 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 TUBA3CQ13748 450 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 RPS6KA2Q15349 733 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 MOGQ16653 247 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 ELMSAN1Q6PJG2 1045 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 BLOC1S3Q6QNY0 202 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 PRR23BQ6ZRT6 265 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 USP51Q70EK9 711 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 PHYKPLQ8IUZ5 450 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.19
SHMT2-231ENST00000557433 TWIST2Q8WVJ9 160 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 ANKRD49Q8WVL7 239 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 COG8Q96MW5 612 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 SLC39A3Q9BRY0 314 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 ANAPC2Q9UJX6 822 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 OAZ3Q9UMX2 235 aa16.27■□□□□ 0.19
SHMT2-231ENST00000557433 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 A0A1W2PP18 115 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 IQCA1LA6NCM1 817 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 GRXCR2A6NFK2 248 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 ESRRBO95718 433 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 CPNE6O95741 557 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 SNAI1O95863 264 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 S1PR4O95977 384 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 GNAO1P09471 354 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 CAPN3P20807 821 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 CCR1P32246 355 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 CHRNA4P43681 627 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 RPS9P46781 194 aaKnown RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 RENBPP51606 427 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 SUOXP51687 545 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 CRYBB1P53674 252 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 RAB39AQ14964 217 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 ZNF280DQ6N043 979 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 FKBP9P1Q75LS8 142 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 PROSER1Q86XN7 944 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 RTL3Q8N8U3 475 aaKnown RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 ZBTB8BQ8NAP8 495 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 DDHD1Q8NEL9 900 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 GIPC3Q8TF64 312 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 CYGBQ8WWM9 190 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 IMP4Q96G21 291 aaKnown RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 ZNF419Q96HQ0 510 aaPredicted RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 C3orf30Q96M34 536 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 FBRSL1Q9HCM7 1045 aaKnown RBP16.26■□□□□ 0.19
SHMT2-231ENST00000557433 TLL2Q9Y6L7 1015 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 SLC30A1Q9Y6M5 507 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 NUP205Q92621 2012 aa16.26■□□□□ 0.19
SHMT2-231ENST00000557433 MROH6A6NGR9 719 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 CDK14O94921 469 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 F2P00734 622 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 LDLRP01130 860 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 FDXRP22570 491 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 SH3BP2P78314 561 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 VPS26BQ4G0F5 336 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 SLC44A4Q53GD3 710 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 ZNF789Q5FWF6 425 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 DDIASQ8IXT1 998 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.25■□□□□ 0.19
SHMT2-231ENST00000557433 ARRDC4Q8NCT1 418 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 OR13J1Q8NGT2 312 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 NRBF2Q96F24 287 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 NUSAP1Q9BXS6 441 aaKnown RBP16.25■□□□□ 0.19
SHMT2-231ENST00000557433 ABHD16BQ9H3Z7 469 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 TFB2MQ9H5Q4 396 aaKnown RBP16.25■□□□□ 0.19
SHMT2-231ENST00000557433 POLR1BQ9H9Y6 1135 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 GMIPQ9P107 970 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 GNPTGQ9UJJ9 305 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 CDC14AQ9UNH5 594 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 ATP6AP2A0A1C7CYW4 349 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 TCRBV5S2A0A599 114 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 UBXN8O00124 270 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 PAGE1O75459 146 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 ATP6AP2O75787 350 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 BAIAP3O94812 1187 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 INHBBP09529 407 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 CD1DP15813 335 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 PORP16435 677 aaPredicted RBP16.25■□□□□ 0.19
SHMT2-231ENST00000557433 C21orf59P57076 290 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 PMS2P3Q13401 168 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 FXNQ16595 210 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 CYP51A1Q16850 503 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 PDCD4Q53EL6 469 aaKnown RBP16.25■□□□□ 0.19
SHMT2-231ENST00000557433 CYBRD1Q53TN4 286 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 PITRM1Q5JRX3 1037 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 GPR158Q5T848 1215 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 GPR150Q8NGU9 434 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 TBC1D15Q8TC07 691 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 TMEM125Q96AQ2 219 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 MAGED4Q96JG8 741 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 PHF12Q96QT6 1004 aa16.25■□□□□ 0.19
SHMT2-231ENST00000557433 BDH2Q9BUT1 245 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms