RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 ZW10O43264 779 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 RASA4O43374 803 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 SLC28A2O43868 658 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 NOBOXO60393 691 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 DEAF1O75398 565 aaPredicted RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 CALB1P05937 261 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 JMJD7P0C870 316 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 LIPCP11150 499 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 UNGP13051 313 aaPredicted RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 CHRNB2P17787 502 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 GPD1P21695 349 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 EPHB2P29323 1055 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 SOX5P35711 763 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 CSRP3P50461 194 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 NDST2P52849 883 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 KIAA1024LP59773 190 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 FMO1Q01740 532 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 PTP4A2Q12974 167 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 INPP5AQ14642 412 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 CYTH1Q15438 398 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 ZSCAN23Q3MJ62 389 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 TCP11X2Q5H9J9 407 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 CERCAMQ5T4B2 595 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 KIAA1614Q5VZ46 1190 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 CRTC1Q6UUV9 634 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 ENPP7Q6UWV6 458 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 USP53Q70EK8 1073 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 ATCAYQ86WG3 371 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 PHF13Q86YI8 300 aaPredicted RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 CCDC185Q8N715 623 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 KYQ8NBH2 561 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 C3orf20Q8ND61 904 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 JOSD2Q8TAC2 188 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 GPT2Q8TD30 523 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 FAM172AQ8WUF8 416 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 TSACCQ96A04 125 aaPredicted RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 WDR92Q96MX6 357 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 EIF3CQ99613 913 aaKnown RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 NCAPGQ9BPX3 1015 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 WRAP53Q9BUR4 548 aaKnown RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 GANQ9H2C0 597 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 EPB41L5Q9HCM4 733 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 PCDH12Q9NPG4 1184 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 STARD5Q9NSY2 213 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 ADAM22Q9P0K1 906 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 LHX3Q9UBR4 397 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 KLQ9UEF7 1012 aa8.71□□□□□ -1.02
VRK1-206ENST00000557222 HEMK1Q9Y5R4 338 aaPredicted RBP8.71□□□□□ -1.02
VRK1-206ENST00000557222 ARHGEF17Q96PE2 2063 aaPredicted RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 PMS2P1A4D2B8 440 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 ANKRD62A6NC57 917 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 CACNB4O00305 520 aaPredicted RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 PES1O00541 588 aaKnown RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 NUDT21O43809 227 aaKnown RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 RPLP0P05388 317 aaKnown RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 DESP17661 470 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 RFC1P35251 1148 aaPredicted RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 TRIM23P36406 574 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 MMP12P39900 470 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 STAT1P42224 750 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 NSFP46459 744 aaKnown RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 LIG3P49916 1009 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 ZNF143P52747 638 aaPredicted RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 JAM2P57087 298 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 POLR2LP62875 67 aaKnown RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 NSUN2Q08J23 767 aaKnown RBP eCLIP8.7□□□□□ -1.02
VRK1-206ENST00000557222 PEX6Q13608 980 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 LINC00303Q3SY05 128 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 RAB6CQ53S08 254 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 WDR59Q6PJI9 974 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 LEKR1Q6ZMV7 388 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 B3GNT8Q7Z7M8 397 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 DTX1Q86Y01 620 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 ZNF354CQ86Y25 554 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 CCNJLQ8IV13 435 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 IL22RA1Q8N6P7 574 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 EXD3Q8N9H8 876 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 OR56A4Q8NGH8 313 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 SLC20A1Q8WUM9 679 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 ECHDC3Q96DC8 303 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 CMKLR1Q99788 373 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 C11orf70Q9BRQ4 267 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 CNPY3Q9BT09 278 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 SELENOOQ9BVL4 669 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 RAB6CQ9H0N0 254 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 LRRC19Q9H756 370 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 ATP13A3Q9H7F0 1226 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 PDFQ9HBH1 243 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 UBA2Q9UBT2 640 aaPredicted RBP8.7□□□□□ -1.02
VRK1-206ENST00000557222 FZD10Q9ULW2 581 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 ATP8A1Q9Y2Q0 1164 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 LOXL2Q9Y4K0 774 aa8.7□□□□□ -1.02
VRK1-206ENST00000557222 A0A1W2PQ67 120 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 ARHGAP42A6NI28 874 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 HGSO14964 777 aaPredicted RBP8.69□□□□□ -1.02
VRK1-206ENST00000557222 INSIG1O15503 277 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 ARHGAP6O43182 974 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 PRAMEF11O60813 436 aa8.69□□□□□ -1.02
VRK1-206ENST00000557222 GFPT2O94808 682 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms