RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 HMBSP08397 361 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 KRT7P08729 469 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 JMJD7P0C870 316 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 FAM200BP0CF97 657 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 MAT2AP31153 395 aaKnown RBP4.83□□□□□ -1.64
SCFD1-223ENST00000557076 SLC6A4P31645 630 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CCKBRP32239 447 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 UBA7P41226 1012 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 PDX1P52945 283 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 PPP2R2AP63151 447 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ZFP36L1Q07352 338 aaKnown RBP4.83□□□□□ -1.64
SCFD1-223ENST00000557076 FOXE3Q13461 319 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ELAVL3Q14576 367 aaKnown RBP4.83□□□□□ -1.64
SCFD1-223ENST00000557076 USP10Q14694 798 aaKnown RBP4.83□□□□□ -1.64
SCFD1-223ENST00000557076 PIK3R6Q5UE93 754 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 FAM46CQ5VWP2 391 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 C1QL3Q5VWW1 255 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CD276Q5ZPR3 534 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 Q6ZSR6 202 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CLEC20AQ6ZU45 233 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 GPRIN1Q7Z2K8 1008 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ABI3BPQ7Z7G0 1075 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ACOT1Q86TX2 421 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 VASH2Q86V25 355 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 UNC93AQ86WB7 457 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 HEATR4Q86WZ0 1026 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ZFAND4Q86XD8 727 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 STK40Q8N2I9 435 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ARHGAP18Q8N392 663 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ZNF548Q8NEK5 533 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-223ENST00000557076 SLC2A14Q8TDB8 520 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 RAD54LQ92698 747 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 PTPRN2Q92932 1015 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 SYAP1Q96A49 352 aaPredicted RBP4.83□□□□□ -1.64
SCFD1-223ENST00000557076 MOCOSQ96EN8 888 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CALML4Q96GE6 196 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 GNRHR2Q96P88 292 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 LRRC37BQ96QE4 947 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ADOQ96SZ5 270 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 IL12RB2Q99665 862 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CGRRF1Q99675 332 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 KRTAP9-8Q9BYQ0 159 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 UBXN6Q9BZV1 441 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CDH19Q9H159 772 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 PCIF1Q9H4Z3 704 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 MRPL44Q9H9J2 332 aaKnown RBP4.83□□□□□ -1.64
SCFD1-223ENST00000557076 PREBQ9HCU5 417 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 DONSONQ9NYP3 566 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 SLCO3A1Q9UIG8 710 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 ERVW-1Q9UQF0 538 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CA5BQ9Y2D0 317 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 DOCK9Q9BZ29 2069 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 CCDC168Q8NDH2 2452 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 HIVEP3Q5T1R4 2406 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 TACC2O95359 2948 aa4.83□□□□□ -1.64
SCFD1-223ENST00000557076 FBN3Q75N90 2809 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 SDK2Q58EX2 2172 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 AKAP9Q99996 3911 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 ITIH6Q6UXX5 1313 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 PRAMEF33A0A0G2JMD5 474 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 TTC34A8MYJ7 566 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 LMO7DNF2Z398 122 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 IRAK2O43187 625 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 AQP9O43315 295 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 STX6O43752 255 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 PRAMEF10O60809 474 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 CUTAO60888 179 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 PRKCGP05129 697 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 GAP43P17677 238 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 TNNI1P19237 187 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 COMTP21964 271 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 HNRNPA2B1P22626 353 aaKnown RBP4.82□□□□□ -1.64
SCFD1-223ENST00000557076 GNLYP22749 145 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 GRK2P25098 689 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 AKT2P31751 481 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 CD70P32970 193 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 GRK3P35626 688 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 CSKP41240 450 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 PSMD8P48556 350 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 MLLT10P55197 1068 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 MYL6P60660 151 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 ECT2LQ008S8 904 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 CCDC15Q0P6D6 951 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 TRPC3Q13507 836 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 ALCAMQ13740 583 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 FZD2Q14332 565 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 ZNF284Q2VY69 593 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 POM121L1PQ3SYA9 428 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 LACTB2Q53H82 288 aaPredicted RBP4.82□□□□□ -1.64
SCFD1-223ENST00000557076 ZNF542PQ5EBM4 170 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 PHF19Q5T6S3 580 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 SFR1Q86XK3 245 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 CBWD2Q8IUF1 395 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 SYCP3Q8IZU3 236 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 SLC22A18ASQ8N1D0 253 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 STPG3Q8N7X2 389 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 C12orf29Q8N999 325 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 TEX19Q8NA77 164 aa4.82□□□□□ -1.64
SCFD1-223ENST00000557076 APOBEC4Q8WW27 367 aaKnown RBP4.82□□□□□ -1.64
SCFD1-223ENST00000557076 USP7Q93009 1102 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms