RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 NAPEPLDQ6IQ20 393 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 RWDD4Q6NW29 188 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 DNAJC24Q6P3W2 148 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 MON1BQ7L1V2 547 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 SLFN11Q7Z7L1 901 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 IQCHQ86VS3 1027 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 NLRP14Q86W24 1093 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 CCDC103Q8IW40 242 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 PCDH20Q8N6Y1 951 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 OR7D4Q8NG98 312 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 UBE2Q2Q8WVN8 375 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 ADAMTS14Q8WXS8 1223 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 ISG20Q96AZ6 181 aaKnown RBP9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 TBC1D31Q96DN5 1066 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 LRIG1Q96JA1 1093 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 SERAC1Q96JX3 654 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 ELF4Q99607 663 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 CNPY3Q9BT09 278 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 HDAC8Q9BY41 377 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 EDEM3Q9BZQ6 932 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 MAGEH1Q9H213 219 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 ERVMER34-1Q9H9K5 563 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 ATP13A1Q9HD20 1204 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 DYRK4Q9NR20 520 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 TMEM248Q9NWD8 314 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 H2AFY2Q9P0M6 372 aaPredicted RBP9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 IL36AQ9UHA7 158 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 HPCAL4Q9UM19 191 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 PLXNA2O75051 1894 aa9.98□□□□□ -0.81
HNRNPC-228ENST00000557033 A0A1W2PQC6 194 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 TMEM8BA6NDV4 472 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 PRAMEF26H0Y7S4 382 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 TLR4O00206 839 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 KPNA3O00505 521 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 YKT6O15498 198 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 HYAL3O43820 417 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 ZNF821O75541 412 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 IL33O95760 270 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 TOP3BO95985 862 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 WNT1P04628 370 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 CTSLP07711 333 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 GLDCP23378 1020 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 RRM1P23921 792 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 RXRGP48443 463 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 METAP1P53582 386 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 TAS2R38P59533 333 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 ARF5P84085 180 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 SETMARQ53H47 684 aaPredicted RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 RAB6CQ53S08 254 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 KCNT1Q5JUK3 1230 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 PIP5KL1Q5T9C9 394 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 CAVIN1Q6NZI2 390 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 C22orf39Q6P5X5 142 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 DCUN1D2Q6PH85 259 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 UNQ6494/PRO21346Q6UXR6 183 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 LINGO4Q6UY18 593 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 DPY19L3Q6ZPD9 716 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 ERN2Q76MJ5 926 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 DRC7Q8IY82 874 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 MCOLN2Q8IZK6 566 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 CHCHD4Q8N4Q1 142 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 OXR1Q8N573 874 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 CCDC185Q8N715 623 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 ARHGEF2Q92974 986 aaKnown RBP9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 PPP1R16AQ96I34 528 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 PSMG3-AS1Q96PY0 264 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 HEPHQ9BQS7 1158 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 SYT11Q9BT88 431 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 RAB6CQ9H0N0 254 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 CASS4Q9NQ75 786 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 GDF3Q9NR23 364 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 PARVAQ9NVD7 372 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 DONSONQ9NYP3 566 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 AIPL1Q9NZN9 384 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 DNAI1Q9UI46 699 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 SPTBN2O15020 2390 aa9.97□□□□□ -0.81
HNRNPC-228ENST00000557033 TMEM131Q92545 1883 aa9.96□□□□□ -0.81
HNRNPC-228ENST00000557033 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 ZSCAN5CA6NGD5 496 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 WASH4PA8MWX3 477 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 C1QTNF9BB2RNN3 333 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 FAM72CH0Y354 149 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 PLK4O00444 970 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 CCP110O43303 1012 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 TNFSF14O43557 240 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 KDELR3O43731 214 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 RAMP2O60895 175 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 LEFTY1O75610 366 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 PRAMEF1O95521 474 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 CD160O95971 181 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 GSNP06396 782 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 FTH1P19P0C7X4 201 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 C1QTNF9P0C862 333 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 GZMAP12544 262 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 SPINK2P20155 84 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 HTR7P34969 479 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 ACVRL1P37023 503 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 ARRB1P49407 418 aaPredicted RBP9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 NXPH1P58417 271 aa9.96□□□□□ -0.82
HNRNPC-228ENST00000557033 YBEYP58557 167 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms