RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 DEFB118Q96PH6 123 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 PKMYT1Q99640 499 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 RTP3Q9BQQ7 232 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 PAAF1Q9BRP4 392 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 TMEM175Q9BSA9 504 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 DHRS4Q9BTZ2 278 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 SNRNP25Q9BV90 132 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 ULBP1Q9BZM6 244 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZCWPW1Q9H0M4 648 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 OSBPL2Q9H1P3 480 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 FBXO44Q9H4M3 255 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 WDCPQ9H6R7 721 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 WDR26Q9H7D7 661 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 SAYSD1Q9NPB0 183 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ABCC13Q9NSE7 274 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 TBC1D13Q9NVG8 400 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 COMMD8Q9NX08 183 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 MTMR10Q9NXD2 777 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 CWC15Q9P013 229 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 FETUBQ9UGM5 382 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 XPO7Q9UIA9 1087 aaKnown RBP4.56□□□□□ -1.68
SRP54-212ENST00000556992 OGDHLQ9ULD0 1010 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 SORCS3Q9UPU3 1222 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 NAALADL1Q9UQQ1 740 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 OTOFQ9HC10 1997 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 ZNF236Q9UL36 1845 aa4.56□□□□□ -1.68
SRP54-212ENST00000556992 RBBP6Q7Z6E9 1792 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 SF3B1O75533 1304 aaKnown RBP eCLIP4.55□□□□□ -1.688e-10■■■■■ 32.7
SRP54-212ENST00000556992 POLR2AP24928 1970 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 GMNCA6NCL1 334 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 AP3B1O00203 1094 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 EEF2KO00418 725 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 TRDMT1O14717 391 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 PPP1R12AO14974 1030 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 LPXNO60711 386 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 NBNO60934 754 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CDH16O75309 829 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SPAG6O75602 509 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ACSL3O95573 720 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ABHD16AO95870 558 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 PRLP01236 227 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CXCL10P02778 98 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SHBGP04278 402 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 GSTA2P09210 222 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CCL5P13501 91 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ZNF37AP17032 561 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 NAT1P18440 290 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 RBL1P28749 1068 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CCR1P32246 355 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 HPDP32754 393 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 RFC2P35250 354 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CHKAP35790 457 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 MAGEA6P43360 314 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 MMP13P45452 471 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ALDH7A1P49419 539 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 KPNA1P52294 538 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 YWHAGP61981 247 aaKnown RBP eCLIP4.55□□□□□ -1.68
SRP54-212ENST00000556992 RPL10AP62906 217 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 GNGT1P63211 74 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 COG7P83436 770 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SMAD3P84022 425 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 ZNF33AQ06730 810 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 PDIA2Q13087 525 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 GPR17Q13304 367 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 PAFAH1B3Q15102 231 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 PARP6Q2NL67 630 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CTXN3Q4LDR2 81 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CCDC38Q502W7 563 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SLC39A12Q504Y0 691 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 RAB6CQ53S08 254 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 DNAJC21Q5F1R6 531 aaKnown RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 BRMS1LQ5PSV4 323 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 LGSNQ5TDP6 509 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 FAM171A1Q5VUB5 890 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 NPNTQ6UXI9 565 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SLC39A5Q6ZMH5 540 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 C3orf62Q6ZUJ4 267 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 RFX8Q6ZV50 586 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CYS1Q717R9 158 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 FGD2Q7Z6J4 655 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 TADA2BQ86TJ2 420 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 FAM131BQ86XD5 332 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 TDRPQ86YL5 185 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 LRRC49Q8IUZ0 686 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ZBED8Q8IZ13 594 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 VPS52Q8N1B4 723 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 NUP93Q8N1F7 819 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 RIBC1Q8N443 379 aaPredicted RBP4.55□□□□□ -1.68
SRP54-212ENST00000556992 CCDC185Q8N715 623 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 NAT8LQ8N9F0 302 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ATP11CQ8NB49 1132 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 GLIS1Q8NBF1 620 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 PLA2G15Q8NCC3 412 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 MCUQ8NE86 351 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 ZMIZ2Q8NF64 920 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 OR10T2Q8NGX3 314 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 CPT1CQ8TCG5 803 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 SH3TC2Q8TF17 1288 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 RNF139Q8WU17 664 aa4.55□□□□□ -1.68
SRP54-212ENST00000556992 C2orf15Q8WU43 125 aaKnown RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms