RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 RETSATQ6NUM9 610 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 C22orf39Q6P5X5 142 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 IGFL3Q6UXB1 125 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 NLRP8Q86W28 1048 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 SFTPA2Q8IWL1 248 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 CCDC65Q8IXS2 484 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 ARFGAP1Q8N6T3 406 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 PCDH20Q8N6Y1 951 aaKnown RBP5.75□□□□□ -1.49
ATXN3-245ENST00000556958 FAM184AQ8NB25 1140 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 PARD3BQ8TEW8 1205 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 COG1Q8WTW3 980 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 FAR1Q8WVX9 515 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 OR1E3Q8WZA6 343 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 NINJ1Q92982 152 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 DNAJC19Q96DA6 116 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 PDXPQ96GD0 296 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 SLC39A13Q96H72 371 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 CEP63Q96MT8 703 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 RPRD1AQ96P16 312 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-245ENST00000556958 SLC38A3Q99624 504 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 TRIM62Q9BVG3 475 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 CEP44Q9C0F1 390 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 TNKS2Q9H2K2 1166 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 LHX9Q9NQ69 397 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 DLL4Q9NR61 685 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 AGPAT3Q9NRZ7 376 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 SPATS2LQ9NUQ6 558 aaKnown RBP5.75□□□□□ -1.49
ATXN3-245ENST00000556958 TMEM9Q9P0T7 183 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 CGNQ9P2M7 1197 aaKnown RBP5.75□□□□□ -1.49
ATXN3-245ENST00000556958 CCDC39Q9UFE4 941 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 LNPEPQ9UIQ6 1025 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 MOSPD1Q9UJG1 213 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 EDARQ9UNE0 448 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 FARSAQ9Y285 508 aaKnown RBP5.75□□□□□ -1.49
ATXN3-245ENST00000556958 OR51B4Q9Y5P0 310 aa5.75□□□□□ -1.49
ATXN3-245ENST00000556958 ACANP16112 2415 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 KCNU1A8MYU2 1149 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 RNF103O00237 685 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 AREL1O15033 823 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 PPM1DO15297 605 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 THAP12O43422 761 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 SMAD6O43541 496 aaKnown RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ENDOD1O94919 500 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 PLEKP08567 350 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 HOXC4P09017 264 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 LCP1P13796 627 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ADSLP30566 484 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 HNRNPH3P31942 346 aaKnown RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 CSF2RBP32927 897 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 IDH3AP50213 366 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 SUOXP51687 545 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 IST1P53990 364 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 CTBSQ01459 385 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 FOXD4Q12950 439 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 MTM1Q13496 603 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 WSCD2Q2TBF2 565 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ZACNQ401N2 412 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 HGSNATQ68CP4 663 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ANKRD40Q6AI12 368 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 FIGNL1Q6PIW4 674 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 FOXR2Q6PJQ5 311 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ZNF517Q6ZMY9 492 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 Q6ZS92 163 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ZNF765Q7L2R6 523 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 BTLAQ7Z6A9 289 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 CIR1Q86X95 450 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 PLXDC1Q8IUK5 500 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 FAM186BQ8IYM0 893 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 DCAF4L2Q8NA75 395 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 CT55Q8WUE5 264 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 NCSTNQ92542 709 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 SH3KBP1Q96B97 665 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ELMO3Q96BJ8 720 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 MTFMTQ96DP5 389 aaKnown RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 SGSM3Q96HU1 749 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 LLPHQ9BRT6 129 aaKnown RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 OSBPL1AQ9BXW6 950 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ZCCHC2Q9C0B9 1178 aaKnown RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 NIF3L1Q9GZT8 377 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 PDE7BQ9NP56 450 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ARHGEF38Q9NXL2 777 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 TAAR2Q9P1P5 351 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 HECAQ9UBI9 543 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 XPO7Q9UIA9 1087 aaKnown RBP5.74□□□□□ -1.49
ATXN3-245ENST00000556958 ITM2BQ9Y287 266 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 NTNG1Q9Y2I2 539 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 TBC1D30Q9Y2I9 924 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 OR1A2Q9Y585 309 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 SHANK1Q9Y566 2161 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 PKDREJQ9NTG1 2253 aa5.74□□□□□ -1.49
ATXN3-245ENST00000556958 TRGV8A0A0C4DH27 118 aa5.73□□□□□ -1.49
ATXN3-245ENST00000556958 A0A1W2PQJ5 194 aa5.73□□□□□ -1.49
ATXN3-245ENST00000556958 GOLGA6L3A6NEY3 463 aa5.73□□□□□ -1.49
ATXN3-245ENST00000556958 LRRIQ3A6PVS8 624 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-245ENST00000556958 CCL21O00585 134 aa5.73□□□□□ -1.49
ATXN3-245ENST00000556958 SART1O43290 800 aaKnown RBP5.73□□□□□ -1.49
ATXN3-245ENST00000556958 NDUFB5O43674 189 aa5.73□□□□□ -1.49
ATXN3-245ENST00000556958 SNAP91O60641 907 aa5.73□□□□□ -1.49
ATXN3-245ENST00000556958 JRKO75564 520 aa5.73□□□□□ -1.49
ATXN3-245ENST00000556958 SPAG6O75602 509 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms