RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 LMNB2Q03252 620 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 HLA-BQ31612 363 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 RANBP10Q6VN20 620 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 TECPR1Q7Z6L1 1165 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 IQCHQ86VS3 1027 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 ATL2Q8NHH9 583 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 SKA1Q96BD8 255 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 GPR63Q9BZJ6 419 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 DDX47Q9H0S4 455 aaKnown RBP17.47■□□□□ 0.39
SHMT2-225ENST00000556798 CAAP1Q9H8G2 361 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 LRRC40Q9H9A6 602 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 PIH1D1Q9NWS0 290 aaKnown RBP17.47■□□□□ 0.39
SHMT2-225ENST00000556798 CEP250Q9BV73 2442 aa17.47■□□□□ 0.39
SHMT2-225ENST00000556798 E7EVH7 732 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 CDX4O14627 284 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-225ENST00000556798 FOXD2O60548 495 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-225ENST00000556798 AP2A1O95782 977 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 KRT14P02533 472 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 HOXD11P31277 338 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-225ENST00000556798 RABIFP47224 123 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 LMAN1P49257 510 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 TERF1P54274 439 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 OVGP1Q12889 678 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 SEMA5AQ13591 1074 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 PDE1CQ14123 709 aaPredicted RBP17.46■□□□□ 0.39
SHMT2-225ENST00000556798 INPP5AQ14642 412 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 DENND5AQ6IQ26 1287 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 CCHCR1Q8TD31 782 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 SCAMP4Q969E2 229 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 AP2M1Q96CW1 435 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 ZDHHC5Q9C0B5 715 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 ABCG8Q9H221 673 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 GAREM1Q9H706 876 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 TMEM9BQ9NQ34 198 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 GDF3Q9NR23 364 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 GPR27Q9NS67 375 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 FNDC3AQ9Y2H6 1198 aaKnown RBP17.46■□□□□ 0.39
SHMT2-225ENST00000556798 OR1A2Q9Y585 309 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 DNAH14Q0VDD8 3507 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 PLXNB3Q9ULL4 1909 aa17.46■□□□□ 0.39
SHMT2-225ENST00000556798 C4orf47A7E2U8 309 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 BUD23O43709 281 aaKnown RBP17.45■□□□□ 0.38
SHMT2-225ENST00000556798 MAGEC1O60732 1142 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 CER1O95813 267 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 PAFAH1B1P43034 410 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 SPINT3P49223 89 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 FNTAP49354 379 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 BASP1P80723 227 aaKnown RBP17.45■□□□□ 0.38
SHMT2-225ENST00000556798 IL9RQ01113 521 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 MTM1Q13496 603 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 UAP1L1Q3KQV9 507 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 ALS2CLQ60I27 953 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 RAET1GQ6H3X3 334 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 ESRP1Q6NXG1 681 aaKnown RBP17.45■□□□□ 0.38
SHMT2-225ENST00000556798 PNCKQ6P2M8 343 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 IL27RAQ6UWB1 636 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 GLT6D1Q7Z4J2 308 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 TMC3Q7Z5M5 1100 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 KLHL7Q8IXQ5 586 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 TTC30BQ8N4P2 665 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 LRRC45Q96CN5 670 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 AGAP2Q99490 1192 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 BPIFA1Q9NP55 256 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 PKD2L2Q9NZM6 624 aa17.45■□□□□ 0.38
SHMT2-225ENST00000556798 PSMD3O43242 534 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 APRTP07741 180 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 THOP1P52888 689 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 GPS1Q13098 491 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 ZNF423Q2M1K9 1284 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 STPG1Q5TH74 334 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 OR52K1Q8NGK4 314 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 FAM174AQ8TBP5 190 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 ZNF592Q92610 1267 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 SRPK1Q96SB4 655 aaKnown RBP17.44■□□□□ 0.38
SHMT2-225ENST00000556798 APOOQ9BUR5 198 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 RIOK2Q9BVS4 552 aaKnown RBP17.44■□□□□ 0.38
SHMT2-225ENST00000556798 HACD3Q9P035 362 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 NEU2Q9Y3R4 380 aa17.44■□□□□ 0.38
SHMT2-225ENST00000556798 ERI2A8K979 691 aaKnown RBP17.43■□□□□ 0.38
SHMT2-225ENST00000556798 ECEL1O95672 775 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 SOD1P00441 154 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 TSHRP16473 764 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 TPH1P17752 444 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 GRIA1P42261 906 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 GPR1P46091 355 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 DPTQ07507 201 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 MSLNQ13421 630 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-225ENST00000556798 FZD2Q14332 565 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 PTPRCAPQ14761 206 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 ZNF542PQ5EBM4 170 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 C4orf22Q6V702 233 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 PPP1R21Q6ZMI0 780 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 ZNF765Q7L2R6 523 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 HEATR4Q86WZ0 1026 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 NRSN1Q8IZ57 195 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 GPR26Q8NDV2 337 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 GRK7Q8WTQ7 553 aa17.43■□□□□ 0.38
SHMT2-225ENST00000556798 FUBP1Q96AE4 644 aaKnown RBP17.43■□□□□ 0.38
SHMT2-225ENST00000556798 ELF4Q99607 663 aaPredicted RBP17.43■□□□□ 0.38
SHMT2-225ENST00000556798 LGR4Q9BXB1 951 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms