RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 FAM129CQ86XR2 697 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 PHF13Q86YI8 300 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-221ENST00000556571 NRSN1Q8IZ57 195 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 NLGN4XQ8N0W4 816 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 NLGN4YQ8NFZ3 816 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-221ENST00000556571 APOBEC4Q8WW27 367 aaKnown RBP11.87□□□□□ -0.51
ACTN1-221ENST00000556571 PATE1Q8WXA2 126 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 SPOCK2Q92563 424 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 PCDHB18PQ96TA0 734 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 CNPY3Q9BT09 278 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 FRMD8Q9BZ67 464 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-221ENST00000556571 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 GANQ9H2C0 597 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 GPN2Q9H9Y4 310 aaPredicted RBP11.87□□□□□ -0.51
ACTN1-221ENST00000556571 LMBRD1Q9NUN5 540 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 OCIAD1Q9NX40 245 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 PDP2Q9P2J9 529 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 B4GALT6Q9UBX8 382 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 DACH1Q9UI36 760 aa11.87□□□□□ -0.51
ACTN1-221ENST00000556571 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 EIF3CLB5ME19 914 aaKnown RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 IVLP07476 585 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 DESP17661 470 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 NFKBIAP25963 317 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 EEF1GP26641 437 aaKnown RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 TEAD1P28347 426 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 CSF2RBP32927 897 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 MAN1A1P33908 653 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 ADCY8P40145 1251 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 CDK3Q00526 305 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 MC1RQ01726 317 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 CNGA3Q16281 694 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 CLEC16AQ2KHT3 1053 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 ANKS6Q68DC2 871 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 DNAJC24Q6P3W2 148 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 CBARPQ8N350 705 aaPredicted RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 RTP4Q96DX8 246 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 ABHD17AQ96GS6 310 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 AHCYL2Q96HN2 611 aaKnown RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 PSMG3-AS1Q96PY0 264 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 PSKH2Q96QS6 385 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 EIF3CQ99613 913 aaKnown RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 ZPBPQ9BS86 351 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 SPRY4Q9C004 299 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 TRIT1Q9H3H1 467 aaKnown RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 SP110Q9HB58 689 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 TMEM9Q9P0T7 183 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 SLC17A4Q9Y2C5 497 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 ST14Q9Y5Y6 855 aa11.86□□□□□ -0.51
ACTN1-221ENST00000556571 ZFC3H1O60293 1989 aaKnown RBP11.86□□□□□ -0.51
ACTN1-221ENST00000556571 TCRBV5S1A1TA0A578 114 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 EEF2KO00418 725 aaKnown RBP11.85□□□□□ -0.51
ACTN1-221ENST00000556571 DAPK3O43293 454 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 DUX1O43812 170 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 HEXIM1O94992 359 aaKnown RBP11.85□□□□□ -0.51
ACTN1-221ENST00000556571 MBD3O95983 291 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 PRKAR1AP10644 381 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 VIPR1P32241 457 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 ETV3P41162 512 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 ACTR1BP42025 376 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 JAM2P57087 298 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 ACTR1AP61163 376 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 POLR2FP61218 127 aaKnown RBP11.85□□□□□ -0.51
ACTN1-221ENST00000556571 MC2RQ01718 297 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 IL10RBQ08334 325 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 ABHD18Q0P651 414 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 CDC20Q12834 499 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 SEPT6Q14141 434 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 CRTC2Q53ET0 693 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-221ENST00000556571 C4orf17Q53FE4 359 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 TCP11X2Q5H9J9 407 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 CEACAM20Q6UY09 585 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 BMPERQ8N8U9 685 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 OR10G6Q8NH81 332 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 DTD2Q96FN9 168 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 SCARF2Q96GP6 870 aaPredicted RBP11.85□□□□□ -0.51
ACTN1-221ENST00000556571 MCEEQ96PE7 176 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 SLC38A3Q99624 504 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 ZMYND15Q9H091 742 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 VPS16Q9H269 839 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 CREBBPQ92793 2442 aa11.85□□□□□ -0.51
ACTN1-221ENST00000556571 ANKRD36A6QL64 1941 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 LOC101059948A0A1B0GTJ6 334 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 PSMD11O00231 422 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 DFFAO00273 331 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 HTRA2O43464 458 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-221ENST00000556571 SOCS5O75159 536 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 CYP2A6P11509 494 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-221ENST00000556571 FASLGP48023 281 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 POLD2P49005 469 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 PPM1FP49593 454 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-221ENST00000556571 RPL7AP62424 266 aaKnown RBP11.84□□□□□ -0.51
ACTN1-221ENST00000556571 KLRB1Q12918 225 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 SYCP1Q15431 976 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 DEFB109BQ30KR1 87 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 LACTB2Q53H82 288 aaPredicted RBP11.84□□□□□ -0.51
ACTN1-221ENST00000556571 RAET1GQ6H3X3 334 aa11.84□□□□□ -0.51
ACTN1-221ENST00000556571 DCUN1D2Q6PH85 259 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms