RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 FUBP1Q96AE4 644 aaKnown RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 SKA1Q96BD8 255 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 EID2BQ96D98 161 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 RTP4Q96DX8 246 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 SPATA13Q96N96 652 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ELF4Q99607 663 aaPredicted RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 C1QTNF7Q9BXJ2 289 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 FRMD8P1Q9BZ68 369 aaPredicted RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 CAAP1Q9H8G2 361 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 GDF3Q9NR23 364 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 UBP1Q9NZI7 540 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 KLHL8Q9P2G9 620 aaPredicted RBP9.66□□□□□ -0.86
SRP54-210ENST00000556380 FAM153AQ9UHL3 310 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 JRKLQ9Y4A0 524 aa9.66□□□□□ -0.86
SRP54-210ENST00000556380 ANKRD36A6QL64 1941 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 ADAMTS9Q9P2N4 1935 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 SPTY2D1-AS1A0A0U1RR47 76 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 DCDC2BA2VCK2 349 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 A6NNZ2 444 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 PSMD11O00231 422 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 TOR1BO14657 336 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 ENC1O14682 589 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 LIASO43766 372 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 CBFA2T3O75081 653 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 PMPCBO75439 489 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 ZNF189O75820 626 aaPredicted RBP9.65□□□□□ -0.86
SRP54-210ENST00000556380 NDST3O95803 873 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 HOXC4P09017 264 aaPredicted RBP9.65□□□□□ -0.86
SRP54-210ENST00000556380 ATXN1LP0C7T5 689 aaKnown RBP9.65□□□□□ -0.86
SRP54-210ENST00000556380 CXCR5P32302 372 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 ADRA1AP35348 466 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 ETV3P41162 512 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 RABIFP47224 123 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 ID4P47928 161 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 YPEL5P62699 121 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 DPTQ07507 201 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 INPP5AQ14642 412 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 IRF4Q15306 451 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 UAP1L1Q3KQV9 507 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 ZNF569Q5MCW4 686 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 LRRC66Q68CR7 880 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 RANBP10Q6VN20 620 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 Q6ZVL8 140 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 USP45Q70EL2 814 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 RAVER1Q8IY67 606 aaKnown RBP9.65□□□□□ -0.86
SRP54-210ENST00000556380 NDUFAF2Q8N183 169 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 RASGEF1CQ8N431 466 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 FAM71DQ8N9W8 422 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 PLA2G15Q8NCC3 412 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 LPCAT1Q8NF37 534 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 CCDC110Q8TBZ0 833 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 SAP25Q8TEE9 199 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 C1orf54Q8WWF1 131 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 DTD2Q96FN9 168 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 IFT43Q96FT9 208 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 MLPHQ9BV36 600 aaPredicted RBP9.65□□□□□ -0.86
SRP54-210ENST00000556380 ADGRE3Q9BY15 652 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 GBA3Q9H227 469 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 SLC24A3Q9HC58 644 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 TM7SF3Q9NS93 570 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 KCND1Q9NSA2 647 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 KLF15Q9UIH9 416 aa9.65□□□□□ -0.86
SRP54-210ENST00000556380 PNMA8BQ9ULN7 279 aaPredicted RBP9.65□□□□□ -0.86
SRP54-210ENST00000556380 F5H423 210 aaPredicted RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 K7ESM1 405 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 CEP104O60308 925 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 WFS1O76024 890 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 CLDN7O95471 211 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 METTL18O95568 372 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 FGGP02679 453 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 ATP1A1P05023 1023 aaKnown RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 C1SP09871 688 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 ZNF30P17039 623 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 CSRP1P21291 193 aaKnown RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 NFKBIAP25963 317 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 TEAD1P28347 426 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 STIP1P31948 543 aaKnown RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 EPHB1P54762 984 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 GDF10P55107 478 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 BNIP3Q12983 259 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 EIF2B5Q13144 721 aaKnown RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 MPP3Q13368 585 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 MSLNQ13421 630 aaPredicted RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 MTM1Q13496 603 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 GALNT3Q14435 633 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 ACOX1Q15067 660 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 PCSK7Q16549 785 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 CCNG2Q16589 344 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 SIRPB2Q5JXA9 342 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 KCTD11Q693B1 232 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 ITPRIPL1Q6GPH6 555 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 ESRP1Q6NXG1 681 aaKnown RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 PNCKQ6P2M8 343 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 DRICH1Q6PGQ1 229 aaPredicted RBP9.64□□□□□ -0.87
SRP54-210ENST00000556380 ZNF765Q7L2R6 523 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 KDELC2Q7Z4H8 507 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 TMC3Q7Z5M5 1100 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 OXR1Q8N573 874 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 PAF1Q8N7H5 531 aa9.64□□□□□ -0.87
SRP54-210ENST00000556380 WDR24Q96S15 920 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms