RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 AGGF1Q8N302 714 aaeCLIP9.21□□□□□ -0.94
ACTN1-218ENST00000556343 CAMKK1Q8N5S9 505 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 FLCNQ8NFG4 579 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 PJA1Q8NG27 643 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 OR4L1Q8NH43 312 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 OR14C36Q8NHC7 312 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 UHMK1Q8TAS1 419 aaKnown RBP9.21□□□□□ -0.94
ACTN1-218ENST00000556343 DTX3LQ8TDB6 740 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 ULK4Q96C45 1275 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 SGSM3Q96HU1 749 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 DNAJC1Q96KC8 554 aaKnown RBP9.21□□□□□ -0.94
ACTN1-218ENST00000556343 MRGPRX1Q96LB2 322 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 FCRL3Q96P31 734 aaPredicted RBP9.21□□□□□ -0.94
ACTN1-218ENST00000556343 ZIM3Q96PE6 472 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 TCF12Q99081 682 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 TMEM109Q9BVC6 243 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 FOXQ1Q9C009 403 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 CHRDQ9H2X0 955 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 FAM83DQ9H4H8 585 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 SGK2Q9HBY8 427 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 PREBQ9HCU5 417 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 IARS2Q9NSE4 1012 aaKnown RBP9.21□□□□□ -0.94
ACTN1-218ENST00000556343 CATSPERZQ9NTU4 200 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 MOCS1Q9NZB8 636 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 RABGEF1Q9UJ41 708 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 FADS3Q9Y5Q0 445 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 PRUNE2Q8WUY3 3088 aa9.21□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3DA0A087WVF3 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3IA0A087WXS9 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3EA0A087X179 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3KA0A087X1G2 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 GLYATL1P3A0A0U1RQE8 302 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TLDC2A0PJX2 215 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3FA6NER0 549 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 FAM159BA6NKW6 160 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 GOLGA8CPA6NN73 597 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 A8MX80 341 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3LB9A6J9 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 MAP2K7O14733 419 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 AURKAO14965 403 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 AREL1O15033 823 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CD3EAPO15446 510 aaKnown RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 RGS16O15492 202 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CDH16O75309 829 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 NDUFS3O75489 264 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 KRT37O76014 449 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 KRT38O76015 456 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TM7SF2O76062 418 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 GOT2P00505 430 aaKnown RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 PRKCGP05129 697 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3HP0C7X1 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 ERVK-10P10266 1014 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 C7P10643 843 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 OGNP20774 298 aaKnown RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 COL9A1P20849 921 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CNTFP26441 200 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 MC4RP32245 332 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 SPRP35270 261 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 MMP12P39900 470 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CXCL12P48061 93 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 ARCN1P48444 511 aaKnown RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 POLD2P49005 469 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 SPINT3P49223 89 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TTPAP49638 278 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 LIG3P49916 1009 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CCR3P51677 355 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CSE1LP55060 971 aaKnown RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 DCDC1P59894 354 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CACNG1Q06432 222 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CDKN3Q16667 212 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 KRT71Q3SY84 523 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 KBTBD12Q3ZCT8 623 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 GPR33Q49SQ1 333 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 HSP90AA5PQ58FG0 334 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 ZRANB3Q5FWF4 1079 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CEP85LQ5SZL2 805 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TEDDM1Q5T9Z0 273 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 RNF187Q5TA31 235 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3GQ6DHY5 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3CQ6IPX1 549 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 KIAA1161Q6NSJ0 714 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TMEM92Q6UXU6 159 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 LIPIQ6XZB0 460 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TAS2R42Q7RTR8 314 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 SNX20Q7Z614 316 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 PTAR1Q7Z6K3 402 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 NLRP8Q86W28 1048 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TDRPQ86YL5 185 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBC1D3Q8IZP1 549 aaPredicted RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 PPM1NQ8N819 430 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 OR13C4Q8NGS5 318 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 GPR150Q8NGU9 434 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 HEXDCQ8WVB3 486 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 HMGB4Q8WW32 186 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 ERLEC1Q96DZ1 483 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 TBATAQ96M53 351 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 PLEKHG4BQ96PX9 1271 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 CPNE1Q99829 537 aa9.2□□□□□ -0.94
ACTN1-218ENST00000556343 MKRN2Q9H000 416 aaKnown RBP9.2□□□□□ -0.94
ACTN1-218ENST00000556343 BTBD1Q9H0C5 482 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms