RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 YWHAQP27348 245 aa7□□□□□ -1.29
TDP1-213ENST00000555880 SLC7A2P52569 658 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CDKN2DP55273 166 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CDKL1Q00532 357 aa7□□□□□ -1.29
TDP1-213ENST00000555880 DSC2Q02487 901 aa7□□□□□ -1.29
TDP1-213ENST00000555880 SLC10A7Q0GE19 358 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ZNF235Q14590 738 aa7□□□□□ -1.29
TDP1-213ENST00000555880 INPP5AQ14642 412 aa7□□□□□ -1.29
TDP1-213ENST00000555880 RPS6KA2Q15349 733 aa7□□□□□ -1.29
TDP1-213ENST00000555880 NFE2Q16621 373 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 NRF1Q16656 503 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PARP15Q460N3 678 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TMEM259Q4ZIN3 620 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ACBD5Q5T8D3 534 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 IRAK1BP1Q5VVH5 260 aa7□□□□□ -1.29
TDP1-213ENST00000555880 MSANTD2Q6P1R3 559 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CYP2R1Q6VVX0 501 aa7□□□□□ -1.29
TDP1-213ENST00000555880 LARP4Q71RC2 724 aaKnown RBP eCLIP7□□□□□ -1.29
TDP1-213ENST00000555880 RPS27LQ71UM5 84 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 DDIASQ8IXT1 998 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ALDH16A1Q8IZ83 802 aa7□□□□□ -1.29
TDP1-213ENST00000555880 NUP93Q8N1F7 819 aa7□□□□□ -1.29
TDP1-213ENST00000555880 MIER2Q8N344 545 aa7□□□□□ -1.29
TDP1-213ENST00000555880 OR52K2Q8NGK3 314 aa7□□□□□ -1.29
TDP1-213ENST00000555880 OR2T34Q8NGX1 318 aa7□□□□□ -1.29
TDP1-213ENST00000555880 OR2T3Q8NH03 318 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ANKRD49Q8WVL7 239 aa7□□□□□ -1.29
TDP1-213ENST00000555880 LRTOMTQ8WZ04 291 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PEX13Q92968 403 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PSMG2Q969U7 264 aa7□□□□□ -1.29
TDP1-213ENST00000555880 THAP11Q96EK4 314 aa7□□□□□ -1.29
TDP1-213ENST00000555880 DUS3LQ96G46 650 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 BTN2A3PQ96KV6 586 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ZNF597Q96LX8 424 aa7□□□□□ -1.29
TDP1-213ENST00000555880 KLHL5Q96PQ7 755 aa7□□□□□ -1.29
TDP1-213ENST00000555880 ADAM2Q99965 735 aa7□□□□□ -1.29
TDP1-213ENST00000555880 HOPXQ9BPY8 73 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 POLR1EQ9GZS1 481 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 SEMA6AQ9H2E6 1030 aa7□□□□□ -1.29
TDP1-213ENST00000555880 NOL6Q9H6R4 1146 aaKnown RBP7□□□□□ -1.29
TDP1-213ENST00000555880 COQ10BQ9H8M1 238 aa7□□□□□ -1.29
TDP1-213ENST00000555880 NMUR1Q9HB89 426 aa7□□□□□ -1.29
TDP1-213ENST00000555880 POPDC3Q9HBV1 291 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PRDM9Q9NQV7 894 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PRDM5Q9NQX1 630 aaPredicted RBP7□□□□□ -1.29
TDP1-213ENST00000555880 GID8Q9NWU2 228 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TMEM181Q9P2C4 612 aa7□□□□□ -1.29
TDP1-213ENST00000555880 CRYL1Q9Y2S2 319 aa7□□□□□ -1.29
TDP1-213ENST00000555880 NDUFAF1Q9Y375 327 aa7□□□□□ -1.29
TDP1-213ENST00000555880 TLL2Q9Y6L7 1015 aa7□□□□□ -1.29
TDP1-213ENST00000555880 PLXNA3P51805 1871 aa7□□□□□ -1.29
TDP1-213ENST00000555880 A0A0J9YYE9 177 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 ATP6AP2A0A1C7CYW4 349 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 MYADML2A6NDP7 307 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 PRORSD1PA6NEY8 169 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 UBFD1O14562 309 aaKnown RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 AZIN1O14977 448 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 ATP6AP2O75787 350 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 RPP40O75818 363 aaKnown RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 CSPG5O95196 566 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 MT-CO1P00395 513 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TFAP2AP05549 437 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 HAPLN1P10915 354 aaPredicted RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 GFAPP14136 432 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 ZNF26P17031 533 aaPredicted RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 FDXRP22570 491 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 FGFR3P22607 806 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 PSMA4P25789 261 aaKnown RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 ETFBP38117 255 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 PBX3P40426 434 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 FCGRTP55899 365 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 USP46P62068 366 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TXNL4AP83876 142 aaKnown RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 CREB5Q02930 508 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 CACNB2Q08289 660 aaPredicted RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 IL10RBQ08334 325 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 MGAT3Q09327 533 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 EFEMP1Q12805 493 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 BNIP2Q12982 314 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 APOFQ13790 326 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 IKBKEQ14164 716 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 POLD3Q15054 466 aaPredicted RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 CYTH1Q15438 398 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 USP41Q3LFD5 358 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 SPATS1Q496A3 300 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 MTX3Q5HYI7 312 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 MS4A13Q5J8X5 152 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 MFSD14CQ5VZR4 134 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 BORAQ6PGQ7 559 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 KLHDC10Q6PID8 442 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 GLB1LQ6UWU2 654 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 ZBTB49Q6ZSB9 765 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 ISCA2Q86U28 154 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 LDB1Q86U70 411 aaPredicted RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 PIM3Q86V86 326 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 CHERPQ8IWX8 916 aaKnown RBP6.99□□□□□ -1.29
TDP1-213ENST00000555880 BBS5Q8N3I7 341 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TEX26Q8N6G2 289 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 TRIML2Q8N7C3 387 aa6.99□□□□□ -1.29
TDP1-213ENST00000555880 PTGR2Q8N8N7 351 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms