RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 HEATR4Q86WZ0 1026 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 NDUFAF2Q8N183 169 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 GALNT15Q8N3T1 639 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 OR56A4Q8NGH8 313 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 SPATA22Q8NHS9 363 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 TEKT5Q96M29 485 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 QKIQ96PU8 341 aaKnown RBP eCLIP20.48■□□□□ 0.87
VTI1B-205ENST00000555543 LYSMD1Q96S90 227 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 SLC25A51Q9H1U9 297 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 GLOD4Q9HC38 313 aa20.48■□□□□ 0.87
VTI1B-205ENST00000555543 GOLGA6CA6NDK9 693 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 GOLGA6BA6NDN3 693 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 TPP1O14773 563 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 YY2O15391 372 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 CLDN7O95471 211 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 MT-CYBP00156 380 aaPredicted RBP20.47■□□□□ 0.87
VTI1B-205ENST00000555543 GOLGA6DP0CG33 693 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 MYCLP1P12525 358 aaPredicted RBP20.47■□□□□ 0.87
VTI1B-205ENST00000555543 CD68P34810 354 aaPredicted RBP20.47■□□□□ 0.87
VTI1B-205ENST00000555543 BLKP51451 505 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 CDKN3Q16667 212 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 HES3Q5TGS1 186 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 RAET1GQ6H3X3 334 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 AADACL2Q6P093 401 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 KDELC2Q7Z4H8 507 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 ATL2Q8NHH9 583 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 SCAMP4Q969E2 229 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 BOCQ9BWV1 1114 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 TEX101Q9BY14 249 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 ABCG8Q9H221 673 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 KCTD5Q9NXV2 234 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 GOLGA6AQ9NYA3 693 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 DGKBQ9Y6T7 804 aa20.47■□□□□ 0.87
VTI1B-205ENST00000555543 CCDC66A2RUB6 948 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 ANKRD66B4E2M5 251 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 APOC4-APOC2K7ER74 178 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 APOC2P02655 101 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 ANXA6P08133 673 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 CDK4P11802 303 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 RWDD2BP57060 319 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 COPS2P61201 443 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 CDK3Q00526 305 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 DPTQ07507 201 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 KIF5AQ12840 1032 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 CAMK2BQ13554 666 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 PCSK7Q16549 785 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 C6orf132Q5T0Z8 1188 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 TMPRSS12Q86WS5 348 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 SLC35F3Q8IY50 421 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 FSTL5Q8N475 847 aaPredicted RBP20.46■□□□□ 0.87
VTI1B-205ENST00000555543 C10orf88Q9H8K7 445 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 UBP1Q9NZI7 540 aa20.46■□□□□ 0.87
VTI1B-205ENST00000555543 PACSIN2Q9UNF0 486 aaPredicted RBP20.46■□□□□ 0.87
VTI1B-205ENST00000555543 C1orf232A0A0U1RR37 186 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 PRSS38A1L453 326 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 GOLGA6L6A8MZA4 724 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 TNFRSF10CO14798 259 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 FTCDO95954 541 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 CAPNS1P04632 268 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 PYGMP11217 842 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 CTSEP14091 401 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 NFKB1P19838 968 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 KELP23276 732 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 TEAD1P28347 426 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 PTPN7P35236 360 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 INSM1Q01101 510 aaPredicted RBP20.45■□□□□ 0.86
VTI1B-205ENST00000555543 NOMO1Q15155 1222 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 ELOCQ15369 112 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 GUSBP11Q6P575 273 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 ZNF567Q8N184 647 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 KDF1Q8NAX2 398 aaPredicted RBP20.45■□□□□ 0.86
VTI1B-205ENST00000555543 PTCD2Q8WV60 388 aaKnown RBP20.45■□□□□ 0.86
VTI1B-205ENST00000555543 AP2M1Q96CW1 435 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 AGAP2Q99490 1192 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 MLPHQ9BV36 600 aaPredicted RBP20.45■□□□□ 0.86
VTI1B-205ENST00000555543 ADGRE3Q9BY15 652 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 FRMD8Q9BZ67 464 aaPredicted RBP20.45■□□□□ 0.86
VTI1B-205ENST00000555543 OSBPL8Q9BZF1 889 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 USP29Q9HBJ7 922 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 CYP4F12Q9HCS2 524 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 PHPT1Q9NRX4 125 aaPredicted RBP20.45■□□□□ 0.86
VTI1B-205ENST00000555543 DNPEPQ9ULA0 475 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 CAPN6Q9Y6Q1 641 aa20.45■□□□□ 0.86
VTI1B-205ENST00000555543 F5H423 210 aaPredicted RBP20.44■□□□□ 0.86
VTI1B-205ENST00000555543 TNFP01375 233 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 FUCA1P04066 466 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 PIRTP0C851 137 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 GPR1P46091 355 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 OTUD4Q01804 1114 aaKnown RBP20.44■□□□□ 0.86
VTI1B-205ENST00000555543 CDK18Q07002 472 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 SLC14A2Q15849 920 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 ZNF765Q7L2R6 523 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 LYSMD3Q7Z3D4 306 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 PEX26Q7Z412 305 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 TRIM74Q86UV6 250 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 ACTL9Q8TC94 416 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 IFI44Q8TCB0 444 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 HTR3CQ8WXA8 447 aa20.44■□□□□ 0.86
VTI1B-205ENST00000555543 ZCCHC14Q8WYQ9 949 aaKnown RBP20.44■□□□□ 0.86
VTI1B-205ENST00000555543 EID2BQ96D98 161 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms