RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 DEPDC4Q8N2C3 294 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 SPATA20Q8TB22 786 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 LRRC20Q8TCA0 184 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 HCAR2Q8TDS4 363 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 KCTD4Q8WVF5 259 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 NR4A3Q92570 626 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CELF6Q96J87 481 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ZBTB45Q96K62 511 aaPredicted RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ZIM3Q96PE6 472 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TUBGCP5Q96RT8 1024 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 SHCBP1LQ9BZQ2 653 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ADNPQ9H2P0 1102 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 RHOJQ9H4E5 214 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ITM2CQ9NQX7 267 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 COQ4Q9Y3A0 265 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 GLYATL1P3A0A0U1RQE8 302 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 AIM2O14862 343 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 RIPK2O43353 540 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 MGRN1O60291 552 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ULK1O75385 1050 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 PAGE1O75459 146 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ESR1P03372 595 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 C4BPAP04003 597 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 FASP25445 335 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 WEE1P30291 646 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CD86P42081 329 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 AVPR1BP47901 424 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 RPL14P50914 215 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ARHGAP1Q07960 439 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TRAP1Q12931 704 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TARBP2Q15633 366 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 DPY19L1Q2PZI1 675 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TMEM44Q2T9K0 475 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 PGS1Q32NB8 556 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 FBXO43Q4G163 708 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ZNF549Q6P9A3 640 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TMEM26Q6ZUK4 368 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TMPRSS6Q8IU80 811 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 SELENOMQ8WWX9 145 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 BORCS5Q969J3 196 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TRMT61BQ9BVS5 477 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 KCNN2Q9H2S1 579 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 BAIAP2Q9UQB8 552 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 NWD2Q9ULI1 1742 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3DA0A087WVF3 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3IA0A087WXS9 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3EA0A087X179 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3KA0A087X1G2 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3FA6NER0 549 aaPredicted RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ARL5CA6NH57 179 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3LB9A6J9 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 GABRDO14764 452 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TNFAIP8O95379 198 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 BCL10O95999 233 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3HP0C7X1 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CBSLP0DN79 551 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CBSP35520 551 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CXCR3P49682 368 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 SLC5A3P53794 718 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 KDSRQ06136 332 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 BIKQ13323 160 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 NOMO1Q15155 1222 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TSNQ15631 228 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TEX44Q53QW1 395 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 PRAMEF19Q5SWL8 479 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CDCA2Q69YH5 1023 aaPredicted RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3GQ6DHY5 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3CQ6IPX1 549 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TBC1D3Q8IZP1 549 aaPredicted RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CRYBG2Q8N1P7 616 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 HIPK4Q8NE63 616 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ERP27Q96DN0 273 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 ZHX1-C8orf76Q96EF9 292 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 CRELD1Q96HD1 420 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 IL12RB2Q99665 862 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 FAM83CQ9BQN1 747 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 C9orf16Q9BUW7 83 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 RSPH9Q9H1X1 276 aaPredicted RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TSR3Q9UJK0 312 aaKnown RBP8.42□□□□□ -1.06
LINC00641-201ENST00000555379 TPRKBQ9Y3C4 175 aa8.42□□□□□ -1.06
LINC00641-201ENST00000555379 FAM237BA0A1B0GVD1 139 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.41□□□□□ -1.06
LINC00641-201ENST00000555379 MATN3O15232 486 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 NDUFB5O43674 189 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 AKAP8O43823 692 aaKnown RBP8.41□□□□□ -1.06
LINC00641-201ENST00000555379 CD63P08962 238 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 KCNJ1P48048 391 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 SLC1A6P48664 564 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 ARRB1P49407 418 aaPredicted RBP8.41□□□□□ -1.06
LINC00641-201ENST00000555379 NUDT2P50583 147 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 TXNL4AP83876 142 aaKnown RBP8.41□□□□□ -1.06
LINC00641-201ENST00000555379 NR1D2Q14995 579 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 ZC3H14Q6PJT7 736 aaKnown RBP8.41□□□□□ -1.06
LINC00641-201ENST00000555379 DQX1Q8TE96 717 aaKnown RBP8.41□□□□□ -1.06
LINC00641-201ENST00000555379 C17orf62Q9BQA9 187 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 NUSAP1Q9BXS6 441 aaKnown RBP8.41□□□□□ -1.06
LINC00641-201ENST00000555379 GBA3Q9H227 469 aa8.41□□□□□ -1.06
LINC00641-201ENST00000555379 SSU72Q9NP77 194 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms