RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 PDHA1P08559 390 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 ALPIP09923 528 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 C6P13671 934 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 CTPS1P17812 591 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 HNRNPA2B1P22626 353 aaKnown RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 ADRA1AP35348 466 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 LIG3P49916 1009 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 AFF3P51826 1226 aaKnown RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 GPX6P59796 221 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 MSLNQ13421 630 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 SLC29A2Q14542 456 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 SLMAPQ14BN4 828 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 QPCTQ16769 361 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 ZNF284Q2VY69 593 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 HP1BP3Q5SSJ5 553 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 ALS2CLQ60I27 953 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 DENND5AQ6IQ26 1287 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 KDELC1Q6UW63 502 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 TRMT10CQ7L0Y3 403 aaKnown RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 LINC00523Q86TU6 105 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 DENND6BQ8NEG7 585 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 ASB12Q8WXK4 309 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 DNASE2BQ8WZ79 361 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 SERAC1Q96JX3 654 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 MRGPRX2Q96LB1 330 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 SERPINB12Q96P63 405 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 TRIB3Q96RU7 358 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 LYSMD1Q96S90 227 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 C1QTNF2Q9BXJ5 285 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 SLC17A9Q9BYT1 436 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 PHACTR1Q9C0D0 580 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 CDC42EP4Q9H3Q1 356 aaKnown RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 EIF2B3Q9NR50 452 aaKnown RBP10.92□□□□□ -0.66
SHMT2-218ENST00000555213 AASDHPPTQ9NRN7 309 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 KCTD5Q9NXV2 234 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 HACD3Q9P035 362 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 PILRBQ9UKJ0 227 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 PPIL1Q9Y3C6 166 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 TEX264Q9Y6I9 313 aa10.92□□□□□ -0.66
SHMT2-218ENST00000555213 C1orf232A0A0U1RR37 186 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 LOC285095A0A1B0GVY8 99 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 NDC80O14777 642 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 EIF3HO15372 352 aaKnown RBP eCLIP10.91□□□□□ -0.66
SHMT2-218ENST00000555213 BCAT2O15382 392 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-218ENST00000555213 SLC31A1O15431 190 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 LRP3O75074 770 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 AP2A1O95782 977 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 PRLP01236 227 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 C1QAP02745 245 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 SHBGP04278 402 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 CFIP05156 583 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 HNF1BP35680 557 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 RACK1P63244 317 aaKnown RBP10.91□□□□□ -0.66
SHMT2-218ENST00000555213 CDK16Q00536 496 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 RALGDSQ12967 914 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 PDIA2Q13087 525 aaKnown RBP10.91□□□□□ -0.66
SHMT2-218ENST00000555213 MTM1Q13496 603 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 STAT4Q14765 748 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 ACOX1Q15067 660 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 SLC1A5Q15758 541 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 SIRPB2Q5JXA9 342 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 PEAR1Q5VY43 1037 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-218ENST00000555213 LRRC66Q68CR7 880 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 LRRC8BQ6P9F7 803 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 PPP1R21Q6ZMI0 780 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 CCDC25Q86WR0 208 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 SLC25A41Q8N5S1 370 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 OR2W6PQ8NHA6 318 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 FAM174AQ8TBP5 190 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 C9orf72Q96LT7 481 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 SH3GL2Q99962 352 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 TBL1YQ9BQ87 522 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 TSPYL1Q9H0U9 437 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 ARRDC1-AS1Q9H2J1 176 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 TRABDQ9H4I3 376 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 SAYSD1Q9NPB0 183 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 CASS4Q9NQ75 786 aa10.91□□□□□ -0.66
SHMT2-218ENST00000555213 ZFR2Q9UPR6 939 aaKnown RBP10.91□□□□□ -0.66
SHMT2-218ENST00000555213 A8MX80 341 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 C10orf142B7Z368 130 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 FPGTO14772 594 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 WNT9AO14904 365 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 KHNYNO15037 678 aaKnown RBP10.9□□□□□ -0.66
SHMT2-218ENST00000555213 MAGEC1O60732 1142 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 SLC4A1P02730 911 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 NUDT17P0C025 328 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 ATXN1LP0C7T5 689 aaKnown RBP10.9□□□□□ -0.66
SHMT2-218ENST00000555213 MLNP12872 115 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 LHCGRP22888 699 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 MAOBP27338 520 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 ARL4CP56559 192 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 C21orf59P57076 290 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 SEMG2Q02383 582 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 OVGP1Q12889 678 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 LRRC14Q15048 493 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 CNGA3Q16281 694 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 HIF1AQ16665 826 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 DUOXA1Q1HG43 343 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 TRIM61Q5EBN2 209 aa10.9□□□□□ -0.66
SHMT2-218ENST00000555213 DENND2CQ68D51 928 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms