RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 GBA3Q9H227 469 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 ATP13A1Q9HD20 1204 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 NSMCE4AQ9NXX6 385 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 CACNA2D2Q9NY47 1150 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 SLCO3A1Q9UIG8 710 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 LRRC42Q9Y546 428 aa17.43■□□□□ 0.38
SHOX-204ENST00000554971 CBX4O00257 560 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 DIAPH2O60879 1101 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 GPR37L1O60883 481 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 SERPINE1P05121 402 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 MPOP05164 745 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 TPBGLP0DKB5 382 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 YBEYP58557 167 aaPredicted RBP17.42■□□□□ 0.38
SHOX-204ENST00000554971 ECT2LQ008S8 904 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 MTAPQ13126 283 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 SERINC3Q13530 473 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 PDE1CQ14123 709 aaPredicted RBP17.42■□□□□ 0.38
SHOX-204ENST00000554971 PARP15Q460N3 678 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 ACCSLQ4AC99 568 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 ARMC3Q5W041 872 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 KCTD11Q693B1 232 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 LINGO4Q6UY18 593 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 NUDT18Q6ZVK8 323 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 LCA5Q86VQ0 697 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 RASSF3Q86WH2 238 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 KLHDC8BQ8IXV7 354 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 ZNF366Q8N895 744 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 PIWIL2Q8TC59 973 aaKnown RBP17.42■□□□□ 0.38
SHOX-204ENST00000554971 MIPEPQ99797 713 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 SPON2Q9BUD6 331 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 MECRQ9BV79 373 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 C1orf21Q9H246 121 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 TMEM245Q9H330 911 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 DENND2DQ9H6A0 471 aaPredicted RBP17.42■□□□□ 0.38
SHOX-204ENST00000554971 FBXO6Q9NRD1 293 aaPredicted RBP17.42■□□□□ 0.38
SHOX-204ENST00000554971 SYBUQ9NX95 663 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 TAS2R1Q9NYW7 299 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 SEPT10Q9P0V9 454 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 RPS6KL1Q9Y6S9 549 aa17.42■□□□□ 0.38
SHOX-204ENST00000554971 TPP1O14773 563 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 TIMM44O43615 452 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 GSRP00390 522 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 PAPOLAP51003 745 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 RAP1GDS1P52306 607 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 CSE1LP55060 971 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 MRPS21P82921 87 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 PRPSAP1Q14558 356 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 DNAL1Q4LDG9 190 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 N4BP2L1Q5TBK1 243 aaPredicted RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 IL31Q6EBC2 164 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 LINC00523Q86TU6 105 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHOX-204ENST00000554971 LZTR1Q8N653 840 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 TXNDC5Q8NBS9 432 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
SHOX-204ENST00000554971 ACDQ96AP0 544 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 C2orf49Q9BVC5 232 aaPredicted RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 NMUR2Q9GZQ4 415 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 TAGLN3Q9UI15 199 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 ERVW-1Q9UQF0 538 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 EML5Q05BV3 1969 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 J3KR12 359 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 K7ERQ8 282 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 SMAD6O43541 496 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 KLHL2O95198 593 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 TYK2P29597 1187 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 WASP42768 502 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 SERPINB8P50452 374 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 AQP5P55064 265 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 CHPFQ8IZ52 775 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 TEX9Q8N6V9 391 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 KCNV2Q8TDN2 545 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 PPP4R1Q8TF05 950 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 SREK1Q8WXA9 508 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 TSGA13Q96PP4 275 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 TRIM56Q9BRZ2 755 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 IL22Q9GZX6 179 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 PDFQ9HBH1 243 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 GEMIN8Q9NWZ8 242 aaKnown RBP17.41■□□□□ 0.38
SHOX-204ENST00000554971 DONSONQ9NYP3 566 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 STOML1Q9UBI4 398 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 MID2Q9UJV3 735 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 HS3ST2Q9Y278 367 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 SDK1Q7Z5N4 2213 aa17.41■□□□□ 0.38
SHOX-204ENST00000554971 NUMA1Q14980 2115 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 GON4LQ3T8J9 2241 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 CHURC1-FNTBB4DL54 471 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 F8W8V4 182 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 DFFAO00273 331 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 DLL1O00548 723 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 H2AFYO75367 372 aaKnown RBP17.4■□□□□ 0.38
SHOX-204ENST00000554971 ZNF821O75541 412 aaPredicted RBP17.4■□□□□ 0.38
SHOX-204ENST00000554971 KLF8O95600 359 aaPredicted RBP17.4■□□□□ 0.38
SHOX-204ENST00000554971 PROCP04070 461 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 HLA-EP13747 358 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 LIMK2P53671 638 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 NAPEPLDQ6IQ20 393 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 TMEM92Q6UXU6 159 aa17.4■□□□□ 0.38
SHOX-204ENST00000554971 ZNF419Q96HQ0 510 aaPredicted RBP17.4■□□□□ 0.38
SHOX-204ENST00000554971 RBBP8Q99708 897 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms