RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 DMAP1Q9NPF5 467 aaPredicted RBP11.19□□□□□ -0.62
SRP54-205ENST00000554803 KRT82Q9NSB4 513 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 TMEM74BQ9NUR3 256 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 PLK2Q9NYY3 685 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.19□□□□□ -0.62
SRP54-205ENST00000554803 VTI1BQ9UEU0 232 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 ZMYM5Q9UJ78 669 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 TRHDEQ9UKU6 1024 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 STAP1Q9ULZ2 295 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 COMMD3-BMI1R4GMX3 469 aa11.19□□□□□ -0.62
SRP54-205ENST00000554803 MUC22E2RYF6 1773 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 ANAPC1Q9H1A4 1944 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 A0A087WV48 116 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 CXorf49A8MYA2 514 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 H0YJX3 145 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PDLIM1O00151 329 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PIK3R2O00459 728 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ATXN7O15265 892 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 DAB1O75553 588 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 GABBR2O75899 941 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PROCP04070 461 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ITGA2BP08514 1039 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PDHA1P08559 390 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 FTH1P19P0C7X4 201 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 THRAP10827 490 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 FGF3P11487 239 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 CD59P13987 128 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 GABRR2P28476 465 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 DPP6P42658 865 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 NPY2RP49146 381 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 TUFMP49411 452 aaKnown RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 RGS7P49802 495 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 KPNA2P52292 529 aaKnown RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 ATXN3P54252 364 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 SESN3P58005 492 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ABCE1P61221 599 aaKnown RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 PDE1BQ01064 536 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 TSPY1Q01534 308 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 MED21Q13503 144 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PAFAH1B3Q15102 231 aaKnown RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 TAF5Q15542 800 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ADRM1Q16186 407 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PDCD2Q16342 344 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 SLC25A52Q3SY17 297 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ARHGAP15Q53QZ3 475 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PEAR1Q5VY43 1037 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 ITPRIPL1Q6GPH6 555 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 C16orf89Q6UX73 402 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ITIH5Q86UX2 942 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 TREML1Q86YW5 311 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 SCUBE3Q8IX30 993 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 TTC9BQ8N6N2 239 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ZMIZ2Q8NF64 920 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 C2orf15Q8WU43 125 aaKnown RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 NRG4Q8WWG1 115 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 EZH1Q92800 747 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 PSMG2Q969U7 264 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 NTAN1Q96AB6 310 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 TSNARE1Q96NA8 513 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PGLYRP2Q96PD5 576 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 PANX3Q96QZ0 392 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 SMOQ99835 787 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 P2RY13Q9BPV8 354 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 SLC13A1Q9BZW2 595 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 YIPF3Q9GZM5 350 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 CRISPLD1Q9H336 500 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ATXN3LQ9H3M9 355 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 EBF3Q9H4W6 596 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 TASP1Q9H6P5 420 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 SUDS3Q9H7L9 328 aaPredicted RBP11.18□□□□□ -0.62
SRP54-205ENST00000554803 PLAC1Q9HBJ0 212 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 COPG2Q9UBF2 871 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 DNAJC16Q9Y2G8 782 aa11.18□□□□□ -0.62
SRP54-205ENST00000554803 ATMQ13315 3056 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 CABIN1Q9Y6J0 2220 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 MGAQ8IWI9 3026 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 A0A088AWK7 358 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 DYTNA2CJ06 578 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 HMX2A2RU54 273 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 PAPSS1O43252 624 aaPredicted RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 SIN3BO75182 1162 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 AVILO75366 819 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 AP1G2O75843 785 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 USP1O94782 785 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 FBXO21O94952 628 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 LYNP07948 512 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 RALBP11234 206 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 CPA3P15088 417 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 BDNFP23560 247 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 HOXD12P35452 270 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 MATKP42679 507 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 PTGER3P43115 390 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 LIMK2P53671 638 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 ALDH18A1P54886 795 aaKnown RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 MAP3K7CLP57077 242 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 KDSRQ06136 332 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 CDC16Q13042 620 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 TUBB3Q13509 450 aa11.17□□□□□ -0.62
SRP54-205ENST00000554803 RFTN1Q14699 578 aaPredicted RBP11.17□□□□□ -0.62
SRP54-205ENST00000554803 TRIP6Q15654 476 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms