RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 EIF3BP55884 814 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 NEXNQ0ZGT2 675 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 DCTN2Q13561 401 aaKnown RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TAF11Q15544 211 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 INPP5JQ15735 1006 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SERTAD4-AS1Q5TG53 156 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 WDR78Q5VTH9 848 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TMED8Q6PL24 325 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 FAM83HQ6ZRV2 1179 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 COLCA1Q6ZS62 124 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TMTC3Q6ZXV5 915 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 Q7L0L9 218 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 CPLX4Q7Z7G2 160 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SERPINA11Q86U17 422 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 FAM160B2Q86V87 743 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TMC8Q8IU68 726 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 FAM217AQ8IXS0 508 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ZDHHC23Q8IYP9 409 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HORMAD2Q8N7B1 307 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 LRRC57Q8N9N7 239 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ZMIZ2Q8NF64 920 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 OR4N2Q8NGD1 307 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 METTL6Q8TCB7 284 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 KCNG4Q8TDN1 519 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 NSMCE1Q8WV22 266 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ATOH1Q92858 354 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 KLHL29Q96CT2 875 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ZNF333Q96JL9 665 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ZFYVE19Q96K21 471 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 NR1H4Q96RI1 486 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TRMOQ9BU70 441 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HEMGNQ9BXL5 484 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 GLIS2Q9BZE0 524 aaPredicted RBP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 TASP1Q9H6P5 420 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 PCDHB16Q9NRJ7 776 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 C20orf141Q9NUB4 165 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 POT1Q9NUX5 634 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 SEL1LQ9UBV2 794 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 HSPB7Q9UBY9 170 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 COG5Q9UP83 839 aa1.6□□□□□ -2.15
PRPF39-208ENST00000554785 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.6□□□□□ -2.15
PRPF39-208ENST00000554785 ADAMTSL1Q8N6G6 1762 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ADAMTS7Q9UKP4 1686 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CACNA1AO00555 2505 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 MAP3K19Q56UN5 1328 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 MYO9BQ13459 2157 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 TAF1P21675 1872 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 DOCK7Q96N67 2140 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 A0A0G2JK05 382 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 A0A1W2PQM1 296 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 H3BNX3 289 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 STMND1H3BQB6 276 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 LDLRAD4O15165 306 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 USO1O60763 962 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ATG13O75143 517 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ZC3H11AO75152 810 aaKnown RBP eCLIP1.59□□□□□ -2.156e-6■□□□□ 11.2
PRPF39-208ENST00000554785 CRYABP02511 175 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CLEC3BP05452 202 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM191BP0C7N4 346 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 MYZAPP0CAP1 466 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 IRF1P10914 325 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ENO3P13929 434 aaPredicted RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 PTPN2P17706 415 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 PSMA4P25789 261 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 POU1F1P28069 291 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 HOXC9P31274 260 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CPOXP36551 454 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 EPS15P42566 896 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CRKLP46109 303 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 GPR12P47775 334 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 POLD2P49005 469 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CENPAP49450 140 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 TMPRSS3P57727 454 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 RPS3AP61247 264 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 DCAF7P61962 342 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 SLC18A2Q05940 514 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ERV3-1Q14264 604 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 VEPH1Q14D04 833 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 TWIST1Q15672 202 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 TBCEQ15813 527 aaPredicted RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 GSTA3Q16772 222 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 GPATCH4Q5T3I0 446 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CST9Q5W186 159 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ATG9BQ674R7 924 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 NUGGCQ68CJ6 796 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 NCAPH2Q6IBW4 605 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 C9orf47Q6ZRZ4 202 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 GPAT4Q86UL3 456 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 GPSM1Q86YR5 675 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CAMK1DQ8IU85 385 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 CADM3Q8N126 398 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ANKRD52Q8NB46 1076 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 KDM1BQ8NB78 822 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 RASSF8Q8NHQ8 419 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 MPLKIPQ8TAP9 179 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 ETNPPLQ8TBG4 499 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 TMEM174Q8WUU8 243 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 B3GNT4Q9C0J1 378 aa1.59□□□□□ -2.15
PRPF39-208ENST00000554785 RANBP17Q9H2T7 1088 aaKnown RBP1.59□□□□□ -2.15
PRPF39-208ENST00000554785 PLEKHA5Q9HAU0 1116 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms