RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 RBMS1P29558 406 aaKnown RBP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 HTR7P34969 479 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 CSNK1DP48730 415 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 RHDQ02161 417 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 CFHR1Q03591 330 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 VAC14Q08AM6 782 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 SRSF6Q13247 344 aaKnown RBP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 GRM3Q14832 879 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 ELOCQ15369 112 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 KIAA1614Q5VZ46 1190 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 ESRP1Q6NXG1 681 aaKnown RBP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 DCUN1D2Q6PH85 259 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 LVRNQ6Q4G3 990 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 LIPIQ6XZB0 460 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 RD3Q7Z3Z2 195 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 UBL4BQ8N7F7 174 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 GPR156Q8NFN8 814 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 FNIP1Q8TF40 1166 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 LIN37Q96GY3 246 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 WDR92Q96MX6 357 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 RBM15Q96T37 977 aaKnown RBP eCLIP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 CARD6Q9BX69 1037 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 CARD9Q9H257 536 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 MRPL40Q9NQ50 206 aaKnown RBP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 KLQ9UEF7 1012 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 PCSK1NQ9UHG2 260 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 TTC7AQ9ULT0 858 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-215ENST00000554656 ALG6Q9Y672 507 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 DGKBQ9Y6T7 804 aa10.61□□□□□ -0.71
SHMT2-215ENST00000554656 BOD1L1Q8NFC6 3051 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 TTC24A2A3L6 582 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CTAGE15A4D2H0 777 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 TMEM191CA6NGB0 347 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ARHGAP42A6NI28 874 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 K7ENP7 123 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 TRAFD1O14545 582 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-215ENST00000554656 DYNC1I1O14576 645 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 EFSO43281 561 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 RECQL5O94762 991 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-215ENST00000554656 PROSCO94903 275 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 RPLP0P05388 317 aaKnown RBP10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ITGA2BP08514 1039 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ALPIP09923 528 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CTAGE8P0CG41 777 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CTSEP14091 401 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 HGFP14210 728 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 TCF4P15884 667 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ERCC2P18074 760 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 PSMA2P25787 234 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 MIPP30301 263 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 PAFAH1B1P43034 410 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 BLKP51451 505 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 KIAA1024LP59773 190 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 DPYSQ14117 519 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 LY6DQ14210 128 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 TAF1BQ53T94 588 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ERMARDQ5T6L9 678 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ERAP2Q6P179 960 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 INO80CQ6PI98 192 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-215ENST00000554656 RFX8Q6ZV50 586 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 DPPA4Q7L190 304 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 TMPRSS9Q7Z410 1059 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CTAGE6Q86UF2 777 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CREG2Q8IUH2 290 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CTAGE4Q8IX94 777 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 RASGEF1CQ8N431 466 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CCL4L1Q8NHW4 92 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 WDR48Q8TAF3 677 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 WBP1Q96G27 269 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 LGR4Q9BXB1 951 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 TMEM168Q9H0V1 697 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ATP13A3Q9H7F0 1226 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 EPB41L5Q9HCM4 733 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ETNK2Q9NVF9 386 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 IP6K2Q9UHH9 426 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 ANAPC7Q9UJX3 599 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 DOLKQ9UPQ8 538 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 SDK2Q58EX2 2172 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 MYO18BQ8IUG5 2567 aa10.6□□□□□ -0.71
SHMT2-215ENST00000554656 CFAP69A5D8W1 941 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 A8MX80 341 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 DFFAO00273 331 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 PLD2O14939 933 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 LRCH4O75427 683 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 PEX11BO96011 259 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 KRT10P13645 584 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 IL1R2P27930 398 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 HTR1BP28222 390 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 SERPINA4P29622 427 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 SLC5A2P31639 672 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 CTNNA1P35221 906 aaKnown RBP10.59□□□□□ -0.71
SHMT2-215ENST00000554656 UGT1A5P35504 534 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 TRIM23P36406 574 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 MLLT3P42568 568 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-215ENST00000554656 PIGHQ14442 188 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-215ENST00000554656 MESDQ14696 234 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 PTPRRQ15256 657 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 PPP6R3Q5H9R7 873 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-215ENST00000554656 CERCAMQ5T4B2 595 aa10.59□□□□□ -0.71
SHMT2-215ENST00000554656 CFAP58Q5T655 872 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms