RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 APPL1Q9UKG1 709 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 SARDHQ9UL12 918 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 MMP17Q9ULZ9 603 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 VPS9D1Q9Y2B5 631 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 KCTD3Q9Y597 815 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 ACTL7BQ9Y614 415 aa7.65□□□□□ -1.18
TDP1-209ENST00000554180 A0A1W2PQF6 199 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 SMIM23A6NLE4 172 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 CHURC1-FNTBB4DL54 471 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 H3BQF6 201 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 PFDN6O15212 129 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 AP1G1O43747 822 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 FAM155BO75949 473 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 CLDN7O95471 211 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 GOT2P00505 430 aaKnown RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 SNRPAP09012 282 aaKnown RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 LHCGRP22888 699 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 SPRP35270 261 aaPredicted RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 SPAM1P38567 509 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 P2RY2P41231 377 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 SLC1A2P43004 574 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 LEPRP48357 1165 aaKnown RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 PSMD8P48556 350 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 POLD2P49005 469 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 COPAP53621 1224 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 LIMK2P53671 638 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 PTSQ03393 145 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 CACNG1Q06432 222 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 RALGDSQ12967 914 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 TMED2Q15363 201 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 TTC31Q49AM3 519 aaPredicted RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 GPR33Q49SQ1 333 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 FASTKD1Q53R41 847 aaKnown RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 TTMPQ5BVD1 217 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 IER5LQ5T953 404 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 RNF187Q5TA31 235 aaPredicted RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 FBXL19Q6PCT2 694 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 TIFABQ6ZNK6 161 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 STRA8Q7Z7C7 330 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 SDCCAG8Q86SQ7 713 aaPredicted RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 TSPAN33Q86UF1 283 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 CILP2Q8IUL8 1156 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 KRT222Q8N1A0 295 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 TXNDC5Q8NBS9 432 aaKnown RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 RPLP0P6Q8NHW5 317 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 MZB1Q8WU39 189 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.64□□□□□ -1.19
TDP1-209ENST00000554180 ISL2Q96A47 359 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 ARRDC3Q96B67 414 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 ARL8AQ96BM9 186 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 EID2BQ96D98 161 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 SMIM14Q96QK8 99 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 AGAP2Q99490 1192 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 RBBP8Q99708 897 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 MCMBPQ9BTE3 642 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 OSBPL6Q9BZF3 934 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 CENPHQ9H3R5 247 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 RHOJQ9H4E5 214 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 ZDHHC4Q9NPG8 344 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 IARS2Q9NSE4 1012 aaKnown RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 CATSPERZQ9NTU4 200 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 SMOXQ9NWM0 555 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 KCTD5Q9NXV2 234 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 IL1RAPL1Q9NZN1 696 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 FBXO5Q9UKT4 447 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 FBXL21Q9UKT6 434 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 CORO1CQ9ULV4 474 aaPredicted RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 PSAT1Q9Y617 370 aa7.64□□□□□ -1.19
TDP1-209ENST00000554180 TCF20Q9UGU0 1960 aaKnown RBP7.64□□□□□ -1.19
TDP1-209ENST00000554180 MYO10Q9HD67 2058 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 ANKRD36A6QL64 1941 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 TRBV5-4A0A0C4DH59 114 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 GLYATL1P3A0A0U1RQE8 302 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 KANSL1LA0AUZ9 987 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 CCDC162PA2VCL2 907 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 AGAP14A8MT82 685 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 MID1O15344 667 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 CD3EAPO15446 510 aaKnown RBP7.63□□□□□ -1.19
TDP1-209ENST00000554180 SPINT1O43278 529 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 TSPAN6O43657 245 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 BUD23O43709 281 aaKnown RBP7.63□□□□□ -1.19
TDP1-209ENST00000554180 ATG13O75143 517 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 PIAS1O75925 651 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 PRAMEF1O95521 474 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 SLC4A1P02730 911 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 DNTTP04053 509 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 ITGA2BP08514 1039 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 C1SP09871 688 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 ELFN1P0C7U0 828 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 CHRNB1P11230 501 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 BMP1P13497 986 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 BPIP17213 487 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 KRT15P19012 456 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 ITGALP20701 1170 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 TARSP26639 723 aaKnown RBP7.63□□□□□ -1.19
TDP1-209ENST00000554180 PMLP29590 882 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 MC4RP32245 332 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 FOXN2P32314 431 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 DRD3P35462 400 aa7.63□□□□□ -1.19
TDP1-209ENST00000554180 PPARGP37231 505 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms