RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 THOC5Q13769 683 aaKnown RBP14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ITGA9Q13797 1035 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 GAS6Q14393 721 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 STAT4Q14765 748 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 CDKN3Q16667 212 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 KYNUQ16719 465 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ZNF284Q2VY69 593 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 MAP7D1Q3KQU3 841 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 LRRC73Q5JTD7 316 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 HP1BP3Q5SSJ5 553 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-210ENST00000553950 MRNIPQ6NTE8 343 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.49□□□□□ -0.09
SHMT2-210ENST00000553950 LIPIQ6XZB0 460 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 TAOK1Q7L7X3 1001 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 HDXQ7Z353 690 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 KCNMB4Q86W47 210 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 OR4K2Q8NGD2 314 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 OR2T34Q8NGX1 318 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ANKRD7Q92527 254 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 MFSD3Q96ES6 412 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 CYTH2Q99418 400 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 PCED1AQ9H1Q7 454 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 SEMA4AQ9H3S1 761 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ACSS3Q9H6R3 686 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ITM2CQ9NQX7 267 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ZFATQ9P243 1243 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 TXNDC16Q9P2K2 825 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 VPS9D1Q9Y2B5 631 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 SLC30A1Q9Y6M5 507 aa14.49□□□□□ -0.09
SHMT2-210ENST00000553950 ZCWPW2A0A1B0GU75 182 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 TCRBV9S1A1TA0A576 114 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 WNT9AO14904 365 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 LZTS3O60299 673 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-210ENST00000553950 TM7SF2O76062 418 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 SLC34A2O95436 690 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 CLDN7O95471 211 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 C1SP09871 688 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 C6P13671 934 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 NMBRP28336 390 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 SSTR1P30872 391 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 SPINT3P49223 89 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 LIG3P49916 1009 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 TPMTP51580 245 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 METAP1P53582 386 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 IFFO1Q0D2I5 559 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 RNF187Q5TA31 235 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-210ENST00000553950 CAPN12Q6ZSI9 719 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 KIAA0408Q6ZU52 694 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 TSPAN33Q86UF1 283 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 SLC26A11Q86WA9 606 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 IGDCC3Q8IVU1 814 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 OR13J1Q8NGT2 312 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 OR14C36Q8NHC7 312 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 ULK4Q96C45 1275 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 NUS1Q96E22 293 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 ZSCAN5AQ9BUG6 496 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 VIPAS39Q9H9C1 493 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 PPANQ9NQ55 473 aaKnown RBP14.48□□□□□ -0.09
SHMT2-210ENST00000553950 C20orf96Q9NUD7 363 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-210ENST00000553950 SPATA6Q9NWH7 488 aaPredicted RBP14.48□□□□□ -0.09
SHMT2-210ENST00000553950 DLGAP2Q9P1A6 1054 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 ITM2BQ9Y287 266 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 IKBKGQ9Y6K9 419 aa14.48□□□□□ -0.09
SHMT2-210ENST00000553950 PLXNB3Q9ULL4 1909 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 GLYATL1P3A0A0U1RQE8 302 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 EXOC1LA0A1B0GW35 172 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 AURKAO14965 403 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 SPINT1O43278 529 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 PCDH8O95206 1070 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 VAPBO95292 243 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 PRAMEF1O95521 474 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 OGNP20774 298 aaKnown RBP14.47□□□□□ -0.09
SHMT2-210ENST00000553950 GPX6P59796 221 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 CREB5Q02930 508 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 PTSQ03393 145 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 CACNG1Q06432 222 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 CASP8Q14790 479 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 ACOX1Q15067 660 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 AGERQ15109 404 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 GPR33Q49SQ1 333 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 FASTKD1Q53R41 847 aaKnown RBP14.47□□□□□ -0.09
SHMT2-210ENST00000553950 LYPLAL1Q5VWZ2 237 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 ESRP1Q6NXG1 681 aaKnown RBP14.47□□□□□ -0.09
SHMT2-210ENST00000553950 LRIG3Q6UXM1 1119 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 SLC36A4Q6YBV0 504 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 CERS6Q6ZMG9 384 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 MARK2Q7KZI7 788 aaKnown RBP14.47□□□□□ -0.09
SHMT2-210ENST00000553950 BMP8AQ7Z5Y6 402 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 GALNT7Q86SF2 657 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 C11orf74Q86VG3 221 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 TRIM69Q86WT6 500 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 CNTN4Q8IWV2 1026 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 RIBC1Q8N443 379 aaPredicted RBP14.47□□□□□ -0.09
SHMT2-210ENST00000553950 OTUD6BQ8N6M0 293 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 DENND6BQ8NEG7 585 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 OR13C4Q8NGS5 318 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 OR6P1Q8NGX9 317 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 FBF1Q8TES7 1133 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 ASB12Q8WXK4 309 aa14.47□□□□□ -0.09
SHMT2-210ENST00000553950 ERLEC1Q96DZ1 483 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms