RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 EID2BQ96D98 161 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 NAF1Q96HR8 494 aaKnown RBP18.2■□□□□ 0.5
SHMT2-206ENST00000553529 OLFM3Q96PB7 478 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 WDR24Q96S15 920 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 RBM15Q96T37 977 aaKnown RBP eCLIP18.2■□□□□ 0.5
SHMT2-206ENST00000553529 DOLKQ9UPQ8 538 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 DUSP10Q9Y6W6 482 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 KIF26BQ2KJY2 2108 aa18.2■□□□□ 0.5
SHMT2-206ENST00000553529 INPP4BO15327 924 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 NOBOXO60393 691 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 TNFP01375 233 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 EIF2S3P41091 472 aaKnown RBP18.19■□□□□ 0.5
SHMT2-206ENST00000553529 GNPDA1P46926 289 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 MAZP56270 477 aaKnown RBP18.19■□□□□ 0.5
SHMT2-206ENST00000553529 E2F1Q01094 437 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 RTP5Q14D33 572 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 NOMO1Q15155 1222 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 QPCTQ16769 361 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 C3orf38Q5JPI3 329 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 ZNF648Q5T619 568 aaPredicted RBP18.19■□□□□ 0.5
SHMT2-206ENST00000553529 TIGD7Q6NT04 549 aaPredicted RBP18.19■□□□□ 0.5
SHMT2-206ENST00000553529 MARK2Q7KZI7 788 aaKnown RBP18.19■□□□□ 0.5
SHMT2-206ENST00000553529 TAF8Q7Z7C8 310 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 MAP7D3Q8IWC1 876 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 RHOT2Q8IXI1 618 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 SDR16C5Q8N3Y7 309 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 SPATA22Q8NHS9 363 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 AGAP3Q96P47 875 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 TEX101Q9BY14 249 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 ABCG4Q9H172 646 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 CARS2Q9HA77 564 aaKnown RBP18.19■□□□□ 0.5
SHMT2-206ENST00000553529 PCDH9Q9HC56 1237 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 ARFGAP3Q9NP61 516 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 SPATS2LQ9NUQ6 558 aaKnown RBP18.19■□□□□ 0.5
SHMT2-206ENST00000553529 UBP1Q9NZI7 540 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 DKK4Q9UBT3 224 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 SUFUQ9UMX1 484 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 PPIL1Q9Y3C6 166 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 PRKAB1Q9Y478 270 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 PCDHA13Q9Y5I0 950 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 ENTPD2Q9Y5L3 495 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 DGKBQ9Y6T7 804 aa18.19■□□□□ 0.5
SHMT2-206ENST00000553529 A0A1W2PQM1 296 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 TOR1BO14657 336 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 SPOPO43791 374 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 SLC4A1P02730 911 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 GP1BAP07359 652 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 CYP2A6P11509 494 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 MYCLP1P12525 358 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ARHGAP25P42331 645 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 CDKN2BP42772 138 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 GABREP78334 506 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 CCL7P80098 99 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ARHGEF7Q14155 803 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ELOCQ15369 112 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 PCSK7Q16549 785 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ISXQ2M1V0 245 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 FOXR1Q6PIV2 292 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 RAD9BQ6WBX8 426 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 USP45Q70EL2 814 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 TMPRSS9Q7Z410 1059 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 FSTL5Q8N475 847 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ARL10Q8N8L6 244 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 Q8N9G6 341 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ACRBPQ8NEB7 543 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 RIOK2Q9BVS4 552 aaKnown RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 FRMD8Q9BZ67 464 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 FOXP3Q9BZS1 431 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ATXN7L1Q9ULK2 861 aaPredicted RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 SATB2Q9UPW6 733 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 ALG6Q9Y672 507 aa18.18■□□□□ 0.5
SHMT2-206ENST00000553529 OAS3Q9Y6K5 1087 aaKnown RBP18.18■□□□□ 0.5
SHMT2-206ENST00000553529 CAPN8A6NHC0 703 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 MT-CYBP00156 380 aaPredicted RBP18.17■□□□□ 0.5
SHMT2-206ENST00000553529 CDK4P11802 303 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 DUSP3P51452 185 aaPredicted RBP18.17■□□□□ 0.5
SHMT2-206ENST00000553529 STC1P52823 247 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 EPHB1P54762 984 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 IFI35P80217 286 aaPredicted RBP18.17■□□□□ 0.5
SHMT2-206ENST00000553529 AADACL2Q6P093 401 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 MICALCLQ6ZW33 695 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 RHOT1Q8IXI2 618 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 FAM46DQ8NEK8 389 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 AP2M1Q96CW1 435 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 TBATAQ96M53 351 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 FAM118BQ9BPY3 351 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 NRSN2Q9GZP1 204 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 RNF215Q9Y6U7 377 aa18.17■□□□□ 0.5
SHMT2-206ENST00000553529 FADS2P1A8MWK0 482 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 LCA5LO95447 670 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 ATP1A1P05023 1023 aaKnown RBP18.16■□□□□ 0.5
SHMT2-206ENST00000553529 HGFP14210 728 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 CD68P34810 354 aaPredicted RBP18.16■□□□□ 0.5
SHMT2-206ENST00000553529 GPR1P46091 355 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 BLKP51451 505 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 CCDC173Q0VFZ6 552 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 TCEAL1Q15170 157 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 RALGPS1Q5JS13 557 aa18.16■□□□□ 0.5
SHMT2-206ENST00000553529 SLC30A9Q6PML9 568 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms