RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 KIF26AQ9ULI4 1882 aaPredicted RBP19.54■□□□□ 0.72
RBFOX1-215ENST00000553186 NPIPB15A6NHN6 443 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 KLF11O14901 512 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 SNX3O60493 162 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 RECQLP46063 649 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 CDKN1CP49918 316 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 RUNX3Q13761 415 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 TAF1BQ53T94 588 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 HECTD2Q5U5R9 776 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 NAIF1Q69YI7 327 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 GRAMD4Q6IC98 578 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 ZNF549Q6P9A3 640 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 PAF1Q8N7H5 531 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 ELSPBP1Q96BH3 223 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 MCCC1Q96RQ3 725 aaPredicted RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 KXD1Q9BQD3 176 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 HEPHQ9BQS7 1158 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 CLDND1Q9NY35 253 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 GTSE1Q9NYZ3 720 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 ACOT9Q9Y305 439 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 VWA7Q9Y334 891 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 SPTBN5Q9NRC6 3674 aaKnown RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 EYSQ5T1H1 3165 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 CLDN7O95471 211 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 COL6A2P12110 1019 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 PSMC3P17980 439 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 PMLP29590 882 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 CCDC153Q494R4 210 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 PSAPL1Q6NUJ1 521 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 GDPD4Q6W3E5 623 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 LCA5Q86VQ0 697 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 GRIN3AQ8TCU5 1115 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 CHFRQ96EP1 664 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 MSLNLQ96KJ4 702 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 TCF12Q99081 682 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 POMKQ9H5K3 350 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 INTS10Q9NVR2 710 aaKnown RBP19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 MTCH2Q9Y6C9 303 aa19.53■□□□□ 0.72
RBFOX1-215ENST00000553186 DNAJC6O75061 913 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 OPRD1P41143 372 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 CDKN2DP55273 166 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 ILF2Q12905 390 aaKnown RBP19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 CES4AQ5XG92 561 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 TSPAN33Q86UF1 283 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 NUDCD3Q8IVD9 361 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 SFTPA1Q8IWL2 248 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 TMEM151AQ8N4L1 468 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 CPA6Q8N4T0 437 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 LPGAT1Q92604 370 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 RIPOR3Q96MK2 946 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 KLHL32Q96NJ5 620 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 RPP25Q9BUL9 199 aaKnown RBP19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 CORO1CQ9ULV4 474 aaPredicted RBP19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 SLC8A2Q9UPR5 921 aa19.52■□□□□ 0.72
RBFOX1-215ENST00000553186 GAPDHSO14556 408 aaPredicted RBP19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 WISP3O95389 354 aaPredicted RBP19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 CTSLP07711 333 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 SLC12A2P55011 1212 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 TIAL1Q01085 375 aaKnown RBP eCLIP19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 SF3A3Q12874 501 aaKnown RBP eCLIP19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 DLG1Q12959 904 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 COL19A1Q14993 1142 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 PCLAFQ15004 111 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 CRTC1Q6UUV9 634 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 TPRG1Q6ZUI0 275 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 SPNS2Q8IVW8 549 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 CCDC63Q8NA47 563 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 KCTD4Q8WVF5 259 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 GPR78Q96P69 363 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 TTYH1Q9H313 450 aaPredicted RBP19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 NMRAL1Q9HBL8 299 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 COPG2Q9UBF2 871 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 PLA2G4CQ9UP65 541 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 FNDC3AQ9Y2H6 1198 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 COL4A3Q01955 1670 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 A0A1W2PQ67 120 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 A8MX80 341 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 LEFTY1O75610 366 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 GJA4P35212 333 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 KDSRQ06136 332 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 EIF4HQ15056 248 aaKnown RBP19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 DBN1Q16643 649 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 EP400NLQ6ZTU2 488 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 USP45Q70EL2 814 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 OTOAQ7RTW8 1153 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 CACNA2D3Q8IZS8 1091 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 ZNF366Q8N895 744 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 TERB1Q8NA31 727 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 TTC8Q8TAM2 541 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 BRD9Q9H8M2 597 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 STARD13Q9Y3M8 1113 aa19.51■□□□□ 0.71
RBFOX1-215ENST00000553186 A0A087X1B8 175 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 EBAG9O00559 213 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 GPR39O43194 453 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 NEFHP12036 1026 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 ALDH3A1P30838 453 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 SEMG2Q02383 582 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 ADGRE1Q14246 886 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 ARSIQ5FYB1 569 aa19.5■□□□□ 0.71
RBFOX1-215ENST00000553186 FAM45BPQ6NSW5 357 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms