RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 NF1P21359 2839 aa11.38□□□□□ -0.59
SUPT16H-202ENST00000552829 MTORP42345 2549 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 ZSCAN5CA6NGD5 496 aaPredicted RBP11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 RECQL5O94762 991 aaPredicted RBP11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 IGSF6O95976 241 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 RHOQP17081 205 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 SCNN1AP37088 669 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 PPP1R2P41236 205 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 COPB1P53618 953 aaKnown RBP11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 GPLD1P80108 840 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 RAPGEF1Q13905 1077 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 EIF2S3LQ2VIR3 472 aaKnown RBP11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 INO80DQ53TQ3 878 aaPredicted RBP11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 TRNP1Q6NT89 227 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 TTI2Q6NXR4 508 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 ENOSF1Q7L5Y1 443 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 ZSWIM9Q86XI8 627 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 ZDHHC17Q8IUH5 632 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 PASD1Q8IV76 773 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 CASKIN2Q8WXE0 1202 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 CTRCQ99895 268 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 GSDMCQ9BYG8 508 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 SUV39H2Q9H5I1 410 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 NOL6Q9H6R4 1146 aaKnown RBP11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 APMAPQ9HDC9 416 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 MLXIPLQ9NP71 852 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 CASS4Q9NQ75 786 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 TMEM248Q9NWD8 314 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 LHX3Q9UBR4 397 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 HPCAL4Q9UM19 191 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 ADGRG1Q9Y653 693 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 RPS6KL1Q9Y6S9 549 aa11.37□□□□□ -0.59
SUPT16H-202ENST00000552829 BICDL2A1A5D9 508 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 BUB1BO60566 1050 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 PIGNO95427 931 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 RECKO95980 971 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 CEACAM5P06731 702 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 XPAP23025 273 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 AK4P27144 223 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 SNX16P57768 344 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 RNASE9P60153 205 aaKnown RBP11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 RALGDSQ12967 914 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 CDKAL1Q5VV42 579 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 PNCKQ6P2M8 343 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 LIPIQ6XZB0 460 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 KDELC2Q7Z4H8 507 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 TRIM59Q8IWR1 403 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 ESX1Q8N693 406 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 NETO2Q8NC67 525 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 FRMD8Q9BZ67 464 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 KLC2Q9H0B6 622 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 TAB2Q9NYJ8 693 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 DNAI1Q9UI46 699 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 ERRFI1Q9UJM3 462 aaPredicted RBP11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 ATP8A1Q9Y2Q0 1164 aa11.36□□□□□ -0.59
SUPT16H-202ENST00000552829 TCP11X1B4DZS4 312 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 FAM72CH0Y354 149 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 PDE2AO00408 941 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 CBFA2T2O43439 604 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 BUB1O43683 1085 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 RAMP2O60895 175 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 MAN1A1P33908 653 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 FLT3P36888 993 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 GABRB2P47870 512 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 FASLGP48023 281 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 UBASH3AP57075 661 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 CTBSQ01459 385 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 ILF3Q12906 894 aaKnown RBP eCLIP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 MRPL49Q13405 166 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 ERV3-1Q14264 604 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 CYTH1Q15438 398 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 NADK2Q4G0N4 442 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 FAM72AQ5TYM5 149 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 PAPD7Q5XG87 772 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 AFMIDQ63HM1 303 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 FAM72DQ6L9T8 149 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 ERAP2Q6P179 960 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 GJB7Q6PEY0 223 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 BRAT1Q6PJG6 821 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 WDR74Q6RFH5 385 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 TMEM135Q86UB9 458 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 FAM72BQ86X60 149 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 FAM131BQ86XD5 332 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 SHC3Q92529 594 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 ZNF641Q96N77 438 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 NAP1L5Q96NT1 182 aaPredicted RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 MAGEB5Q9BZ81 275 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 WDR26Q9H7D7 661 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 CARS2Q9HA77 564 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 SIDT1Q9NXL6 827 aaKnown RBP11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 OR12D3Q9UGF7 316 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 PCDHB3Q9Y5E6 796 aa11.35□□□□□ -0.59
SUPT16H-202ENST00000552829 MYCLP1P12525 358 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 GRNP28799 593 aaKnown RBP11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 CDC25BP30305 580 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 CDH5P33151 784 aaPredicted RBP11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 ADRA1BP35368 520 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 DLSTP36957 453 aa11.34□□□□□ -0.59
SUPT16H-202ENST00000552829 MARSP56192 900 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms