RNA–Protein interactions for RNA: ENST00000552162.5

RAB5C-209, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5C, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-209ENST00000552162 AP1S1P61966 158 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 CDK3Q00526 305 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 CTBSQ01459 385 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 NSUN2Q08J23 767 aaKnown RBP eCLIP16.3■□□□□ 0.2
RAB5C-209ENST00000552162 PEX6Q13608 980 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 DCAF12Q5T6F0 453 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 DENND2CQ68D51 928 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 ANKS6Q68DC2 871 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 SLC45A3Q96JT2 553 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 NSMCE3Q96MG7 304 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 DPYSL5Q9BPU6 564 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 VPS16Q9H269 839 aa16.3■□□□□ 0.2
RAB5C-209ENST00000552162 GPN2Q9H9Y4 310 aaPredicted RBP16.3■□□□□ 0.2
RAB5C-209ENST00000552162 ZNF71Q9NQZ8 489 aaPredicted RBP16.3■□□□□ 0.2
RAB5C-209ENST00000552162 USP9XQ93008 2570 aaPredicted RBP16.29■□□□□ 0.2
RAB5C-209ENST00000552162 GOLGA6CA6NDK9 693 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 GOLGA6BA6NDN3 693 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 DFFAO00273 331 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 EEF2KO00418 725 aaKnown RBP16.29■□□□□ 0.2
RAB5C-209ENST00000552162 NKX2-8O15522 239 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 DUX1O43812 170 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 GOLGA6DP0CG33 693 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 ADCY8P40145 1251 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 ETV3P41162 512 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 ACTR1BP42025 376 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 POLD2P49005 469 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 ACTR1AP61163 376 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 UBE2HP62256 183 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 CDC20Q12834 499 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 SQSTM1Q13501 440 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 RFTN1Q14699 578 aaPredicted RBP16.29■□□□□ 0.2
RAB5C-209ENST00000552162 ARHGAP36Q6ZRI8 547 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 NRSN1Q8IZ57 195 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 BMPERQ8N8U9 685 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 SPOCK2Q92563 424 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 KIAA1143Q96AT1 154 aaPredicted RBP16.29■□□□□ 0.2
RAB5C-209ENST00000552162 DTD2Q96FN9 168 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
RAB5C-209ENST00000552162 KCTD5Q9NXV2 234 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 GOLGA6AQ9NYA3 693 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 PILRAQ9UKJ1 303 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 AP4E1Q9UPM8 1137 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 SLC17A4Q9Y2C5 497 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 MAN2B2Q9Y2E5 1009 aa16.29■□□□□ 0.2
RAB5C-209ENST00000552162 SPENQ96T58 3664 aaKnown RBP16.29■□□□□ 0.2
RAB5C-209ENST00000552162 HEXIM1O94992 359 aaKnown RBP16.28■□□□□ 0.2
RAB5C-209ENST00000552162 IVLP07476 585 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 DESP17661 470 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 VIPR1P32241 457 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 PPM1FP49593 454 aaPredicted RBP16.28■□□□□ 0.2
RAB5C-209ENST00000552162 GPLD1P80108 840 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 IL10RBQ08334 325 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 NCAPHQ15003 741 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 SYCP1Q15431 976 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 CA9Q16790 459 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 PPP1R15BQ5SWA1 713 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 RAET1GQ6H3X3 334 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 TMEM71Q6P5X7 295 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 DOK6Q6PKX4 331 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 HSD11B1LQ7Z5J1 315 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 ARHGAP12Q8IWW6 846 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 NLGN4XQ8N0W4 816 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 NPWQ8N729 165 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 NLGN4YQ8NFZ3 816 aaPredicted RBP16.28■□□□□ 0.2
RAB5C-209ENST00000552162 PDCD6IPQ8WUM4 868 aaKnown RBP16.28■□□□□ 0.2
RAB5C-209ENST00000552162 RTP4Q96DX8 246 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 TEFMQ96QE5 360 aaKnown RBP16.28■□□□□ 0.2
RAB5C-209ENST00000552162 PSKH2Q96QS6 385 aa16.28■□□□□ 0.2
RAB5C-209ENST00000552162 DHX35Q9H5Z1 703 aaKnown RBP16.28■□□□□ 0.2
RAB5C-209ENST00000552162 SPTAN1Q13813 2472 aaKnown RBP16.28■□□□□ 0.2
RAB5C-209ENST00000552162 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.27■□□□□ 0.2
RAB5C-209ENST00000552162 TTC24A2A3L6 582 aaPredicted RBP16.27■□□□□ 0.2
RAB5C-209ENST00000552162 DAPK3O43293 454 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 SOCS5O75159 536 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 CPP00450 1065 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 LHCGRP22888 699 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 RENBPP51606 427 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 OGDHQ02218 1023 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 DCUN1D2Q6PH85 259 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 RFX8Q6ZV50 586 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 ZNF761Q86XN6 746 aaPredicted RBP16.27■□□□□ 0.2
RAB5C-209ENST00000552162 UNC5BQ8IZJ1 945 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 FAM26EQ8N5C1 309 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 AHCYL2Q96HN2 611 aaKnown RBP16.27■□□□□ 0.2
RAB5C-209ENST00000552162 OR2M4Q96R27 311 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 CTRCQ99895 268 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 EFHD1Q9BUP0 239 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 PLEKHM1Q9Y4G2 1056 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
RAB5C-209ENST00000552162 LOC101059948A0A1B0GTJ6 334 aa16.26■□□□□ 0.19
RAB5C-209ENST00000552162 A0A1W2PQ67 120 aa16.26■□□□□ 0.19
RAB5C-209ENST00000552162 EIF3CLB5ME19 914 aaKnown RBP16.26■□□□□ 0.19
RAB5C-209ENST00000552162 HTRA2O43464 458 aaPredicted RBP16.26■□□□□ 0.19
RAB5C-209ENST00000552162 CYP2A6P11509 494 aaPredicted RBP16.26■□□□□ 0.19
RAB5C-209ENST00000552162 ERCC2P18074 760 aa16.26■□□□□ 0.19
RAB5C-209ENST00000552162 NFKBIAP25963 317 aa16.26■□□□□ 0.19
RAB5C-209ENST00000552162 MAP4P27816 1152 aaKnown RBP16.26■□□□□ 0.19
RAB5C-209ENST00000552162 TEAD1P28347 426 aa16.26■□□□□ 0.19
RAB5C-209ENST00000552162 OAS2P29728 719 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms