RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 FOXK1P85037 733 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 CTBSQ01459 385 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 IL10RBQ08334 325 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 CNGA3Q16281 694 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 FKBP15Q5T1M5 1219 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 NKAIN2Q5VXU1 208 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 DENND2CQ68D51 928 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 MON1BQ7L1V2 547 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 NRSN1Q8IZ57 195 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 C9orf43Q8TAL5 461 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 SPOCK2Q92563 424 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 SLC45A3Q96JT2 553 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 PSKH2Q96QS6 385 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 EFHD1Q9BUP0 239 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 FRMD8Q9BZ67 464 aaPredicted RBP14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 AP4E1Q9UPM8 1137 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 UTP20O75691 2785 aaKnown RBP14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 NBPF19A0A087WUL8 3843 aa14.17□□□□□ -0.14
CHMP1A-210ENST00000551981 IGHV1OR21-1A0A087WYE8 117 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 GOLGA6CA6NDK9 693 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 GOLGA6BA6NDN3 693 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 EFCAB7A8K855 629 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 SOCS5O75159 536 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 CPP00450 1065 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 IVLP07476 585 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 GOLGA6DP0CG33 693 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 CYP2A6P11509 494 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 MPSTP25325 297 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 TEAD1P28347 426 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 VIPR1P32241 457 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 ADCY8P40145 1251 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 KLK7P49862 253 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 CDK3Q00526 305 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 CT47A1Q5JQC4 288 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 RAET1GQ6H3X3 334 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 TMEM71Q6P5X7 295 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 NAGSQ8N159 534 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 PDCD6IPQ8WUM4 868 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 PATE1Q8WXA2 126 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 DTD2Q96FN9 168 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 AHCYL2Q96HN2 611 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 CLSTN2Q9H4D0 955 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 DHX35Q9H5Z1 703 aaKnown RBP14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 GPN2Q9H9Y4 310 aaPredicted RBP14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 GOLGA6AQ9NYA3 693 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 SLC17A4Q9Y2C5 497 aa14.16□□□□□ -0.14
CHMP1A-210ENST00000551981 TCRBV5S1A1TA0A578 114 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 PSMD11O00231 422 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 PPM1DO15297 605 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 DUX1O43812 170 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 HEXIM1O94992 359 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 FUCA1P04066 466 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 MAP4P27816 1152 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 CSF2RBP32927 897 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 HSPA9P38646 679 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ETV3P41162 512 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ACTR1BP42025 376 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ACTR1AP61163 376 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 MC1RQ01726 317 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ZNF235Q14590 738 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 LBRQ14739 615 aaKnown RBP14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 NCAPHQ15003 741 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 PPP1R15BQ5SWA1 713 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 TMCO4Q5TGY1 634 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ANKS6Q68DC2 871 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 RFX8Q6ZV50 586 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 NLGN4XQ8N0W4 816 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 NLGN4YQ8NFZ3 816 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 OR10G6Q8NH81 332 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 PCMTD1Q96MG8 357 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ZNF599Q96NL3 588 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ZPBPQ9BS86 351 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 ZNF71Q9NQZ8 489 aaPredicted RBP14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 OCIAD1Q9NX40 245 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 PILRAQ9UKJ1 303 aa14.15□□□□□ -0.14
CHMP1A-210ENST00000551981 USP9XQ93008 2570 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 SPTAN1Q13813 2472 aaKnown RBP14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 EPHB6O15197 1021 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 NKX2-8O15522 239 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 HTRA2O43464 458 aaPredicted RBP14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 ERCC2P18074 760 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 CR2P20023 1033 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 PSMA2P25787 234 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 NOP2P46087 812 aaKnown RBP14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 POLD2P49005 469 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 SEPT6Q14141 434 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 IGFBP7Q16270 282 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 ERMARDQ5T6L9 678 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 DOK6Q6PKX4 331 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 CEACAM20Q6UY09 585 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 ARHGAP36Q6ZRI8 547 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 LURAP1LQ8IV03 231 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 ARHGAP12Q8IWW6 846 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 NEK11Q8NG66 645 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 APOBEC4Q8WW27 367 aaKnown RBP14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 OR2M4Q96R27 311 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 SLC38A3Q99624 504 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 AGPAT1Q99943 283 aa14.14□□□□□ -0.15
CHMP1A-210ENST00000551981 TMEM9Q9P0T7 183 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms